This publication by the Kuster group presents a robust workflow to support the analysis of large cohorts of patient samples using formalin-fixed paraffin-embedded FFPE tissue. They make use of online fractionation by FAIMS requiring 50% less sample than conventional...
This review by the Van Eyk group at Cedars-Sinai Medical Center summarizes the proteomics research, that has helped elucidate hallmark proteins associated with the disease with respect to both short- and long-term diagnosis and prognosis.
This publication by the Mann group, introduces the open-source AlphaTims package with a stand-alone graphical user interface or as part of their AlphaPept ecosystem. With this package, unprocessed data are indexed, accessed, and visualized by a combination of...
This publication by the Li group from University of Waterloo, Canada introduces PointIso, a point cloud based arbitrary-precision deep learning network for peptide feature detection. They used a dataset of HeLa proteomes measured with the Evosep One on a timsTOF Pro...
This publication by the Olsen group at University of Copenhagen describes the carrier proteome effects in single cell proteomics with mixed species TMTpro-labeled samples. Using the 30 SPD method, they show that quantitative precision and signal intensity are limited...
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