LITERATURE ROOM

explore more and find all publications, product brochures

and presentations with Evosep One

Here you can find the latest publications from our users and collaboration partners and also discover older publications. Use the search function to explore our Literature Room or get inspiration from the tags and categories.

TitleMaterialYearAuthorsOrganizationEvosep methodMS instrumentationLearn Morehf:tax:evosep_methodhf:tax:ms_vendor
Integrated proteogenomic analysis for inherited bone marrow failure syndrome2024Manabu Wakamatsu, Hideki Muramatsu, Hironori Sato, Masaki Ishikawa, Ryo Konno, Daisuke Nakajima, Motoharu Hamada, Yusuke Okuno, Yusuke Kawashima, Asahito Hama, Masafumi Ito, Hideto Iwafuchi, Yoshiyuki Takahashi & Osamu OharaDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan

Read publication here

thermo-orbitrap-exploris-480
Multi-omics integration highlights the role of ubiquitination in endometriosis fibrosis2024Mengjie Yang, Hong Jiang, Xinyu Ding, Lu Zhang, Huaying Zhang, Jiahao Chen, Lijun Li, Xinqin He, Zhixiong Huang & Qionghua ChenClinical Medical Research Center for Gynecological Reproductive Health of Fujian Province, Laboratory of Research and Diagnosis of Gynecological Diseases of Xiamen City, China

Read publication here

15-spdtimstof-pro
The comprehensive SARS-CoV-2 ‘hijackome’ knowledge base— reveals signicant changes in host cell protein expression and activation by multiple SARS-CoV-2 variants2024Sini Huuskonen, Xiaonan Liu, Taras Redchuk, Kari Salokas, Rickard Lundberg, Sari Maljanen, Milja Belik, Arttu Reinholm, Pekka Kolehmainen, Garima Tripathi, Pia Laine, Sergei Belanov, Petri Auvinen, Maria Vartiainen, Larissa LaineThe university of Helsinki, Helsinki, Finland

Read publication here

60-spdtimstof-pro
FASTMAP—a flexible and scalable immunopeptidomics pipeline for HLA- and antigen-specific T-cell epitope mapping based on artificial antigen-presenting cells2024Luisa Weisbrod, Luigi Capriotti, Marco Hofmann, Valerie Spieler, Herbert Dersch, Bernd Voedisch, Peter Schmidt, Susanne KnakeRecombinant Protein Discovery, CSL Innovation GmbH, Marburg, Germany

Read publication here

extended-methodthermo-orbitrap-exploris-240
Deep Visual Proteomics advances human colon organoid models by revealing a switch to an in vivo-like phenotype upon xenotransplantation2024Frederik Post, Annika Hausmann, Sonja Kabatnik, Sophia Steigerwald, Alexandra Brand, Ditte Lange Clement, Jonathan Skov, Theresa Louise Boye, Toshiro Sato, Casper Steenholdt, Andreas Mund, Ole Haagen Nielsen, Kim Bak Jensen, Matthias MannNovo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark

Read publication here

whisper-40spdthermo-orbitrap-astral
Comparative proteomic analysis of the ovarian fluid and eggs of Siberian sturgeon2024Natalia Kodzik, Andrzej Ciereszko, Bożena Szczepkowska, Agata Malinowska & Mariola Aleksandra DietrichDepartment of Gamete and Embryo Biology, Institute of Animal Reproduction and Food Research, Polish Academy of Sciences, Poland

Read publication here

15-spdthermo-orbitrap-exploris-480
Unraveling the proteome landscape of mouse hematopoietic stem and progenitor compartment with high sensitivity low-input proteomics2024Nil Üresin, Valdemaras Petrosius, Pedro Aragon-Fernandez, Benjamin Furtwängler, Erwin M. Schoof, & Bo T. PorseThe Finsen Laboratory, Rigshospitalet, Faculty of Health Sciences, University of Copenhagen,Copenhagen, Denmark.

Read publication here

whisper-20spdthermo-orbitrap-eclipse-tribid
Machine learning strategies to tackle data challenges in mass spectrometry-based proteomics2024Ceder Dens, Charlotte Adams, Kris Laukens, Wout BittremieuxAdrem Data Lab, Department of Computer Science, University of Antwerp, Antwerpen, Belgium

Read publication here

timstof-pro
Decrypting the molecular basis of cellular drug phenotypes by dose-resolved expression proteomics2024Stephan Eckert, Nicola Berner, Karl Kramer, Annika Schneider, Julian Müller, Severin Lechner, Sarah Brajkovic, Amirhossein Sakhteman, Christian Graetz, Jonas Fackler, Michael Dudek, Michael W. Pfaffl, Percy Knolle, Stephanie Wilhelm & Bernhard KusterProteomics and Bioanalytics, School of Life Sciences, Technical University of Munich, Freising, Germany

Read publication here

thermo-orbitrap-eclipse-tribid
Mass Spectrometry-Based Proteomics to Evaluate the Circulating Proteome in Idiopathic Pulmonary Fibrosis (IPF)2024A. A. Menon, H. Mulder, M. L. Neely, F. Meissner, B. Gansen, P. Papavasileiou, C. Hesslinger, M. L. Salisbury, B. D. Southern, T. B. Leonard, J. L. ToddMedical University of South Carolina, Charleston, SC, United States

Read publication here

thermo-orbitrap-exploris-480
Longitudinal Fluctuations in Protein Concentrations and Higher-Order Structures in the Plasma Proteome of Kidney Failure Patients Subjected to a Kidney Transplant2024Sofia Kalaidopoulou Nteak, Franziska Völlmy, Marie V. Lukassen, Henk van den Toorn, Maurits A. den Boer, Albert Bondt, Sjors P. A. van der Lans, Pieter-Jan Haas, Arjan D. van Zuilen, Suzan H. M. Rooijakkers, and Albert J. R. HeckBiomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, The Netherlands

Read publication here

30-spdthermo-orbitrap-exploris-480
The proteomic profile is altered but not repaired after bariatric surgery in type 2 diabetes pigs2024Karolina Ferenc, Michał Marcinkowski, Jarosław Olszewski, Paweł Kowalczyk, Tomaš Pilžys, Damian Garbicz, Naser Dib, Bianka Świderska, Piotr Matyba, Zdzisław Gajewski, Elżbieta Grzesiuk & Romuald ZabielskiCenter for Translational Medicine, Warsaw University of Life Sciences, Warsaw, Poland

Read publication here

15-spdthermo-orbitrap-exploris-480
Plasma/Serum Proteomics based on Mass Spectrometry2024Yiying ZhuDepartment of Chemistry, Tsinghua University, Beijing, China

Read publication here

thermo-orbitrap-astral
Reduced ATP turnover during hibernation in relaxed skeletal muscle2024Cosimo de Napoli, Luisa Schmidt, Mauro Montesel, Laura Cussonneau, Samuele Sanniti, Lorenzo Marcucci, Elena Germinario, Jonas Kindberg, Alina Evans, Guillemette Gauquelin-Koch, Fabrice Bertile, Etienne Lefai, Marcus krüger, Leonardo NogaraDepartment of Biomedical Science University of Padova, Italy

Read publication here

60-spdtimstof-pro
Optimization of protocols for blood-derived extracellular vesicles for studies in liver diseases2024Magnolia Martínez-Aguilar, María Camila Trillos-Almanza, Justina C. Wolters, Manon Buist-Homan, TransplantLines Investigators, Frederike van Vilsteren, Hans Blokzijl, Han MoshageDepartment of Gastroenterology and Hepatology, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands

Read publication here

30-spdthermo-orbitrap-exploris-480
Ribosomal composition affects the noncanonical translation and toxicity of polyglycine-containing proteins in fragile X-associated conditions2024Katarzyna Tutak, Izabela Broniarek, Andrzej Zielezinski, Daria Niewiadomska, Anna Baud, Krzysztof SobczakDepartment of Gene Expression, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznan, Poland

Read publication here

thermo-orbitrap-exploris-480
Urinary Proteomics and Outcomes in Heart Failure With Preserved Ejection Fraction2024Yixin Wang, Peter H. Schafer, Sarah Hersey, Leonidas N. Carayannopoulos, Dietmar Seiffert, Ching‐Pin Chang, David A. Gordon, Francisco Ramirez‐Valle, Douglas L. Mann, Thomas P. Cappola and Julio A. ChirinosUniversity of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA

Read publication here

30-spdthermo-q-exactive-hf
Characterization of a Chimeric Resilin-Elastin Structural Protein Dedicated to 3D Bioprinting as a Bioink Component2024Violetta Cecuda-Adamczewska, Agnieszka Romanik-Chruścielewska, Katarzyna Kosowska, Natalia Łukasiewicz, Iwona Sokołowska, Paulina Korycka, Katarzyna Florys-Jankowska, Agnieszka Zakrzewska, Michał Wszoła and Marta KlakFoundation of Research and Science Development, Warsaw, Poland

Read publication here

thermo-orbitrap-exploris-480
Spatial Proteomics Reveals Alcohol-Induced Damages to the Crypts and Villi of the Mouse Small Intestine2024Patil Shivprasad Suresh, Xinguo Sun, Zhanxiang Zhou, and Qibin ZhangCenter for Translational Biomedical Research, University of North Carolina at Greensboro, North Carolina Research Campus, Kannapolis, North Carolina, United States

Read publication here

30-spdthermo-orbitrap-exploris-240
O-linked glycosylations in human milk casein and major whey proteins during lactation2024Martin Nørmark Thesbjerg, Katrine Overgaard Poulsen, Julie Astono, Nina Aagaard Poulsen, Lotte Bach Larsen, Søren Drud-Heydary Nielsen, Allan Stensballe, Ulrik Kræmer SundekildeDepartment of Food Science, Aarhus University, Agro Food Park 48, Aarhus N, Denmark

Read publication here

60-spdtimstof-pro-2
Mannose controls mesoderm specification and symmetry breaking in mouse gastruloids2024Chaitanya Dingare, Dominica Cao, Jenny Jingni Yang, Berna Sozen, Benjamin SteventonDeptartment of Genetics, University of Cambridge, Downing Site, Cambridge, UK,

Read publication here

500-spdbruker-timstof-ht thermo-orbitrap-exploris-240
Theabrownin ameliorated lipid accumulation via modulating circadian rhythms in oleic acid-induced HepG2 cells2024Chunyan Zhao, Lei Zhao, Zelin Li, Yue Miao, Shuwen Lei, Bo Shan, Qiuping Wang, Chao Tan, Chunxiu Peng, Jiashun GongCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China

Read publication here

thermo-orbitrap-exploris-480
Increasing sustainability in palaeoproteomics by optimizing digestion times for large-scale archaeological bone analyses2024Louise Le Meillour, Virginie Sinet-Mathiot, Ragnheiður Diljá Ásmundsdóttir, Jakob Hansen, Dorothea Mylopotamitaki, Gaudry Troché, Huan Xia, Jorsua Herrera Bethencourt, Karen Ruebens, Geoff M. Smith, Zandra Fagernäs, Frido WelkerUniversity of Copenhagen, Copenhagen, Denmark

Read publication here

100-spdthermo-orbitrap-exploris-480
The phosphatase inhibitor LB-100 creates neoantigens in colon cancer cells through perturbation of mRNA splicing2024Matheus H Dias, Vladyslava Liudkovska, Jasmine Montenegro Navarro, Lisanne Giebel, Julien Champagne, Chrysa Papagianni, Onno B Bleijerveld, Arno Velds, Reuven Agami, René Bernards & Maciej CieślaDivision of Molecular Carcinogenesis and Oncode Institute, The Netherlands Cancer Institute, Amsterdam, The Netherlands

Read publication here

extended-methodthermo-orbitrap-exploris-480
A promiscuous mechanism to phase separate eukaryotic carbon fixation in the green lineage2024James Barrett, Mihris I.S. Naduthodi, Yuwei Mao, Clément Dégut, Sabina Musiał, Aidan Salter, Mark C. Leake, Michael J. Plevin, Alistair J. McCormick, James N. Blaza, Luke C.M. MackinderDepartment of Biology, University of York, York, UK

Read publication here

60-spdbruker-timstof-ht
Craspase Orthologs Cleave a Nonconserved Site in Target Protein Csx302024Sam P. B. van Beljouw, Anna C. Haagsma, Konstantinos Kalogeropoulos, Martin Pabst, Stan J. J. BrounsDepartment of Bionanoscience, Delft University of Technology, Delft, Netherlands

Read publication here

whisper-20spdthermo-orbitrap-eclipse-tribid
Relaxation of mucosal fibronectin fibers in late gut inflammation following neutrophil infiltration in mice2024Ronja Rappold, Konstantinos Kalogeropoulus, Ulrich auf dem Keller, Emma Slack, Viola VogelETH Zürich, Switzerland

Read publication here

whisper-20spdthermo-orbitrap-exploris-480
Craspase Orthologs Cleave a Nonconserved Site in Target Protein Csx302024Sam P. B. van Beljouw, Anna C. Haagsma, Konstantinos Kalogeropoulos, Martin Pabst, and Stan J. J. BrounsDepartment of Bionanoscience, Delft University of Technology, Delft, Netherlands

Read publication here

whisper-20spdthermo-orbitrap-eclipse-tribid
Global organization of phenylpropanoid and anthocyanin pathways revealed by proximity labeling of trans-cinnamic acid 4-hydroxylase (CYP73A412) in Petunia inflata petal protoplasts2024Javiera Aravena-Calvo, Silas Busck-Mellor, Tomas LaursenDepartment of Plant and Environmental Sciences (PLEN), Section for Plant Biochemistry, University of Copenhagen, Denmark

Read publication here

30-spdtimstof-pro-2
Lectin-Based Immunophenotyping and Whole Proteomic Profiling of CT-26 Colon Carcinoma Murine Model2024Anna Faragó, Ágnes Zvara, László Tiszlavicz, Éva Hunyadi-Gulyás, Zsuzsanna Darula, Zoltán Hegedűs, Enikő Szabó, Sára Eszter Surguta, József Tóvári, László G. Puskás, and Gábor J. SzebeniAstridbio Technologies Ltd., Wimmer Fülöp utca 1, Hungary

Read publication here

15-spdthermo-orbitrap-fusion-lumos
Enrichment, Characterization, and Proteomic Profiling of Small Extracellular Vesicles Derived from Human Limbal Mesenchymal Stromal Cells and Melanocytes2024Sebastian Kistenmacher, Melanie Schwämmle, Gottfried Martin, Eva Ulrich, Stefan Tholen, Oliver Schilling, Andreas Gießl, Ursula Schlötzer-Schrehardt, Felicitas Bucher, Günther Schlunck, Irina Nazarenko, Thomas Reinhard and Naresh PolisettiEye Center, Medical Center, Faculty of Medicine, University of Freiburg, Freiburg, Germany

Read publication here

30-spdbruker-timstof-flex
Exploring the role of production and release of proteins for microbial interactions in kombucha2024Jacqueline Rodriguez Rey, Thierry Tran, Amaury Aumeunier, Aurélie Rieu, François Verdier, Antoine Martin, Hervé Alexandre, Raphaëlle Tourdot-Maréchal, Cosette GrandvaletUMR PAM 1517, Université Bourgogne, Institut Agro, Dijon, France

Read publication here

30-spdtimstof-pro-2
Plasma complement and coagulation proteins as prognostic factors of negative symptoms: An analysis of the NAPLS 2 and 3 studies2024Jonah F. Byrne, Colm Healy, Melanie Föcking, Meike Heurich, Subash Raj Susai, David Mongan, Kieran Wynne, Eleftheria Kodosaki, Scott W. Woods, Barbara A. Cornblatt, William S. Stone, Daniel H. Mathalon, Carrie E. Bearden, Kristin S. Cadenhead, Jean AddingDepartment of Psychiatry, Royal College of Surgeons in Ireland, University of Medicine and Health Sciences, Dublin, Ireland

Read publication here

timstof-pro
Extracellular vesicles derived CXCL4 is a candidate serum tumor biomarker for colorectal cancer2024Jinye Xie, Shan Xing, Hongbo Jiang, Jiaju Zhang, Daxiao Li, Shiqiong Niu, Zhijian Huang, and Haofan YinDepartment of Laboratory Medicine, Zhongshan City People’s Hospital, Zhongshan, Guangdong, China

Read publication here

30-spdbruker-timstof-pro
ER-export and ARFRP1/AP-1–dependent delivery of SARS-CoV-2 Envelope to lysosomes controls late stages of viral replication2024Guy J. Pearson, Harriet V. Mears, Malgorzata Broncel, Ambrosius P. Snijders, David L. V. Bauer, Jeremy G. CarltonOrganelle Dynamics Laboratory, The Francis Crick Institute, London, UK

Read publication here

thermo-orbitrap-fusion-lumos
Cheap, Robust and Versatile Two-Dimensional Chromatography system for Proteomics of Nanogram Scale Samples2024Eduardo S. Kitano, Gareth Nisbet, Yana Demyanenko, Katarzyna M Kowalczyk, Louisa Iselin, Stephen Cross, Alfredo Castello, Shabaz MohammedRosalind Franklin Institute, Harwell Campus, United Kingdom

Read publication here

30-spdthermo-orbitrap-ascend-tribid
Matrimeres are systemic nanoscale mediators of tissue integrity and function2024Koushik Debnath, Irfan Qayoom, Steven O’Donnell, Julia Ekiert, Can Wang, Mark A. Sanborn, Chang Liu, Ambar Rivera, Ik Sung Cho, Saiumamaheswari Saichellappa, Peter T. Toth, Dolly Mehta, Jalees Rehman, Xiaoping Du, Yu Gao, and Jae-Won ShinDepartment of Pharmacology and Regenerative Medicine, College of Medicine, Chicargo, IL, USA

Read publication here

60-spdthermo-q-exactive-hf
Probe-dependent Proximity Profiling (ProPPr) Uncovers Similarities and Differences in Phospho-Tau-Associated Proteomes Between Tauopathies2024Dmytro Morderer, Melissa C. Wren, Feilin Liu, Naomi Kouri, Anastasiia Maistrenko, Bilal Khalil, Nora Pobitzer, Michelle Salemi, Brett S. Phinney, Dennis W. Dickson, Melissa E. Murray and Wilfried RossollDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, USA

Read publication here

100-spdtimstof-pro-2
Identification of Four Mouse FcRn Splice Variants and FcRn-Specific Vesicles2024George Haddad, Judith BlaineDivision of Renal Disease and Hypertension, Department of Medicine, School of Medicine, University of Colorado, Aurora, USA

Read publication here

bruker-timstof-scp
DIP-MS: ultra-deep interaction proteomics for the deconvolution of protein complexes2024Fabian Frommelt, Andrea Fossati, Federico Uliana, Fabian Wendt, Peng Xue, Moritz Heusel, Bernd Wollscheid, Ruedi Aebersold, Rodolfo Ciuffa & Matthias GstaigerDepartment of Biology, Institute of Molecular Systems Biology, Zurich, Switzerland

Read publication here

60-spdthermo-q-exactive-plus-hybrid-quadrupole-orbitrap
RNA damage compartmentalization by DHX9 stress granules2024Yilong Zhou, Amol Panhale, Maria Shvedunova, Mirela Balan, Alejandro Gomez-Auli, Herbert Holz, Janine Seyfferth, Martin Helmstädter, Séverine Kayser, Yuling Zhao, Niyazi Umut Erdogdu, Iga Grzadzielewska, Gerhard Mittler, Thomas Manke, and Asifa AkhtarMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany

Read publication here

30-spdthermo-orbitrap-exploris-480
NFATC2IP is a mediator of SUMO- dependent genome integrity2024Tiffany Cho, Lisa Hoeg, Dheva Setiaputra, and Daniel DurocherLunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada

Read publication here

60-spdtimstof-pro-2
A Multiomics Assessment of Preoperative Exercise in Pancreatic Cancer Survivors Receiving Neoadjuvant Therapy: A Case Series2024Travis Nemkov, Francesca Cendali, Monika Dzieciatkowska, Daniel Stephenson, Kirk C. Hansen, Catherine M. Jankowski, Angelo D’Alessandro and Ryan J. MarkerDepartment of Biochemistry and Molecular Genetics, Anschutz Medical Campus, University of Colorado, Aurora, USA

Read publication here

bruker-timstof-pro
Integrating multiplex-staining and multiplex-DIA: Profiling the tumor microenvironment spatial proteome for precision cancer research2024Xiang Zheng, Andreas Mund, Matthias MannUniversity of Copenhagen, Copenhagen, Denmark

Read publication here

bruker-timstof-scp
Molecular interactions of human receptor tyrosine kinase oncogenic fusions2024Giovanna Dashi, Markku VarjosaloUniversity of Helsinki, Helsinki, Finland

Read publication here

bruker-timstof-pro
A T6SS in the coral pathogen Vibrio coralliilyticus secretes an arsenal of anti-eukaryotic effectors and contributes to virulence2024Shir Mass, Hadar Cohen, Motti Gerlic, Blake Ushijima, Julia C. van Kessel, Eran Bosis, and Dor SalomonDepartment of Clinical Microbiology and Immunology, School of Medicine, Faculty of Medical and Health Sciences, Tel Aviv University, Israel

Read publication here

15-spdthermo-q-exactive-hf
Proteomic study of left ventricle and cortex in rats after myocardial infarction2024Mengli Chang, Huanhuan Wang, Yuxin Lei, Hongjun Yang, Jing Xu & Shihuan TangInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China

Read publication here

thermo-q-exactive-hf-x
Deciphering molecular mechanisms of synergistic growth reduction in kinase inhibitor combinations2024Eirini Tsirvouli, Ana Martinez del Val, Liv Thommesen, Astrid Lægreid, Martin Kuiper, Jesper Olsen, Åsmund FlobakDepartment of Biology, Norwegian University of Science and Technology, Trondheim, Norway

Read publication here

60-spdthermo-orbitrap-exploris-480
Proteomic Analysis Reveals Trilaciclib-Induced Senescence2024Marina Hermosilla-Trespaderne, Mark Xinchen Hu-Yang, Abeer Dannoura, Andrew M. Frey, Amy L. George, Matthias Trost, José Luis Marín-RubioBiosciences Institute, Newcastle University, Newcastle-upon-Tyne, UK

Read publication here

100-spdbruker-timstof-ht
Widespread S-persulfidation in activated macrophages as a protective mechanism against oxidative-inflammatory stress2024Talal Salti, Ilana Braunstein, Yael Haimovich, Tamar Ziv, Moran BenharDepartment of Biochemistry, Rappaport Faculty of Medicine, Technion–Israel Institute of Technology, Haifa, Israel

Read publication here

15-spdthermo-q-exactive-hf
Theileria parasites sequester host eIF5A to escape elimination by host-mediated autophagy2024Aristeidis Panagiotou, Aurélie Richard, Angélique Amo, Yulianna Koziy, Souhila Medjkane, Sergio Valente, Rossella Fioravanti, Catherine Pioche-Durieu, Laurent Lignière, Guillaume Chevreux, Antonello Mai & Jonathan B. WeitzmanUniversité Paris Cité, CNRS, UMR7126 Epigenetics and Cell Fate, Paris, France

Read publication here

30-spdthermo-orbitrap-fusion-lumos
Human Dermal Decellularized ECM Hydrogels as Scaffolds for 3D In Vitro Skin aging Models2024Estibaliz Fernandez‐Carro, Ana Rosa Remacha, Irene Orera, Giuseppe Lattanzio, Alberto Garcia‐Barrios, Jesús del Barrio, Clara Alcaine and Jesús CirizaTissue Microenvironment (TME) Lab. Aragón Institute of Engineering Research (I3A), University of Zaragoza, Zaragoza, Spain

Read publication here

60-spdbruker-timstof-flex
Direct Relationship between Protein Expression and Progeny Yield of Herpes Simplex Virus 1 Unveils a Rate-limiting Step for Virus Production2024Moeka Nobe, Yuhei Maruzuru, Kosuke Takeshima, Fumio Maeda, Hideo Kusano, Raiki Yoshimura, Takara Nishiyama, Hyeongki Park, Yoshitaka Kozaki, Shingo Iwami, Naoto Koyanagi, Akihisa Kato1, Tohru Natsume, Shungo Adachi, and Yasushi KawaguchiDivision of Molecular Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Japan

Read publication here

100-spdthermo-q-exactive-hf-x
Characterization of preovulatory follicular fluid secretome and its effects on equine oocytes during in vitro maturation2024Javier G. Casado, Eva Pericuesta, Alfonso Gutiérrez-Adán, Esperanza González, Mikel Azkargorta, Ricardo Conde, Maider Bizkarguenaga, Nieves Embade, Félix Elortza, Juan M. Falcón-Pérez, Óscar Millet, Lauro González-Fernández, Beatriz Macías-GarcíaDepartamento de Medicina Animal, Facultad de Veterinaria, Grupo de Investigación Medicina Interna Veterinaria (MINVET), Instituto de Investigación INBIO G+C, Universidad de Extremadura, Cáceres, Spain

Read publication here

30-spdtimstof-pro
Personalized phosphoproteomics of skeletal muscle insulin resistance and exercise links MINDY1 to insulin action2024Johan D. Onslev, Alexis Diaz-Vegas, Magnus R. Leandersson, Jonas Møller Kristensen, Kohei Kido, Erik A. Richter, Kurt Højlund, Benjamin L. Parker, Kristen Cooke, Guang Yang, Christian Pehmøller, Sean J. Humphrey, David E. James, Jørgen F.P. WojtaszewskiCharles Perkins Centre, School of Life and Environmental Sciences, University of Sydney, New South Wales, Australia

Read publication here

30-spdthermo-orbitrap-exploris-480
Comprehensive proteomics of CSF, plasma, and urine identify DDC and other biomarkers of early Parkinson’s disease2024Sephira Ryman, Maya Yutsis, Gayle K. Deutsch, Elizabeth Mormino, Alexandra Trelle, Anthony D. Wagner, Geoffrey A. Kerchner, Lu Tian, Carlos Cruchaga, Victor W. Henderson, Thomas J. Montine, Per Borghammer, Tony Wyss-Coray & Kathleen L. PostonDepartment of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford University, Stanford, CA, USA

Read publication here

timstof-pro
AlphaPept: a modern and open framework for MS-based proteomic2024Maximilian T. Strauss, Isabell Bludau, Wen-Feng Zeng, Eugenia Voytik, Constantin Ammar, Julia P. Schessner, Rajesh Ilango, Michelle Gill, Florian Meier, Sander Willems & Matthias MannDepartment of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany

Read publication here

200-spdtimstof-pro
Neat plasma proteomics: getting the best out of the worst2024Ines Metatla, Kevin Roger, Cerina Chhuon, Sara Ceccacci, Manuel Chapelle, Pierre-Olivier Schmit, Vadim Demichev & Ida Chiara GuerreraProteomics Platform Necker, Université Paris Cité-Structure Fédérative de Recherche Necker, Paris, France, ,

Read publication here

100-spd 60-spd whisper-40spdtimstof-pro
Proteomic profiling of IDH-wildtype Glioblastoma Tissue and Serum uncovers prognostic Subtypes and Marker Candidates2024Tilman Werner, Agnes Schäfer, Michael Hennes, Miguel Cosenza Contreras, Guadalupe Espadas, Eduard Sabido, Lena Cook, Axel Pagenstecher, Niko Pinter, Tobias Feilen, Alexander Grote, Christopher Nimsky, Jörg Walter Bartsch, Oliver SchillingInstitute for Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg

Read publication here

30-spdthermo-orbitrap-fusion-lumos
Structure and interactions of the endogenous human Commander complex2024Saara Laulumaa, Esa-Pekka Kumpula, Juha T. Huiskonen & Markku VarjosaloInstitute of Biotechnology, Helsinki Institute of Life Science HiLIFE, University of Helsinki, Finland

Read publication here

60-spdtimstof-pro
Universal pretreatment development for low-input proteomics using lauryl maltose neopentyl glycol2024Ryo Konno, Masaki Ishikawa, Daisuke Nakajima, Yusuke Endo, Osamu Ohara, Yusuke KawashimaDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Japan

Read publication here

whisper-80-spdthermo-orbitrap-exploris-480
Phosphoproteomic Analysis and Organotypic Cultures for the Study of Signaling Pathways2024Zilu Ye, Hans H. Wandall, and Sally DabelsteenCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark

Read publication here

thermo-orbitrap-exploris-480
TIMAHAC: Streamlined Tandem IMAC-HILIC Workflow for Simultaneous and High-Throughput Plant Phosphoproteomics and N-glycoproteomics2024Chin-Wen Chen, Pei-Yi Lin, Ying-Mi Lai, Miao-Hsia Lin, Shu-Yu Lin, ChuanChih HsuInstitution of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan

Read publication here

30-spdbruker-timstof-ht
Polydopamine nanoparticles as a non-pharmaceutical tool in the treatment of fatty liver disease2024Alessio Carmignani, Matteo Battaglini, Martina Bartolucci, Andrea Petretto, Mirko Prato, Gianni CiofaniIstituto Italiano di Tecnologia, Smart Bio-Interfaces, Pontedera, Italy

Read publication here

30-spdthermo-orbitrap-exploris-480
diaPASEF Enables High-throughput Proteomic Analysis of Host Cell Proteins for Biopharmaceutical Process Development2024Taku Tsukidate, Alyssa Q. Stiving, Shannon Rivera, Ansuman Sahoo, Sri Madabhushi, Xuanwen LiAnalytical Research & Development Mass Spectrometry, New Jersey, United States, ,

Read publication here

100-spd 15-spd 30-spdtimstof-pro-2
SARS-CoV-2 Infection and Anemia—A Focus on RBC Deformability and Membrane Proteomics—Integrated Observational Prospective Study2024Angelo D’Alessandro, Elena Krisnevskaya, Valentina Leguizamon,Ines Hernández, Carolina de la Torre, Joan-Josep Bech, Josep-Tomàs Navarro and Joan-Lluis Vives-CorronsMedical Campus, University of Colorado Anschutz, Aurora, USA

Read publication here

thermo-orbitrap-eclipse-tribid
The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons2024Linda Makhlouf, Joshua J. Peter, Helge M. Magnussen, Rohan Thakur, David Millrine, Thomas C. Minshull, Grace Harrison, Joby Varghese, Frederic Lamoliatte, Martina Foglizzo, Thomas Macartney, Antonio N. Calabrese, Elton Zeqiraj & Yogesh KulathuMRC Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, UK

Read publication here

30-spdthermo-orbitrap-eclipse-tribid
Automated high-throughput biological sex identification from archaeological human dental enamel using targeted proteomics2024Palesa P. Madupe, Gaudry B. Troché, Nuno Vibe Hermann, Marina Martínez de Pinillos, María MartinónTorres, Sandra Mularczyk, Marie Louise Schjellerup Jørkov, Christopher Gerner,Fabian Kanz, Ana Martinez-Val1, Enrico Cappellini, Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty ofHealth and Medical Sciences, University of Copenhagen, Denmark.,

Read publication here

200-spd 30-spdthermo-orbitrap-exploris-480
The Proteome of Extracellular Vesicles Released from Pulmonary Microvascular Endothelium Reveals Impact of Oxygen Conditions on Biotrauma2024Wolfgang Schaubmayr, Beatrix Hochreiter, Eva Hunyadi-Gulyas, Louise Riegler, Katy Schmidt, Akos Tiboldi, Bernhard Moses, Klaus U. Klein, Katharina Krenn, Gisela Scharbert, Thomas Mohr, Johannes A. Schmid, Andreas Spittler,and Verena TretterDepartment of Anesthesia, General Intensive Care and Pain Medicine, Medical University of Vienna, Austria

Read publication here

15-spdthermo-orbitrap-fusion-lumos
PU.1 Eviction at Lymphocyte-Specific Chromatin Domains Mediates Glucocorticoid Response in Acute Lymphoblastic Leukemia2024Yizhou Huang, Han Zhao, Xiaolu Tai, Wenqian Xu, Hansen Kosasih, David Kealy, Katherine Bridge, Weiye Zhao, Andrew Holding, Adam Dowle, Samuel Taylor, Gaoxian Song, Diego Fajardo, Yashna Walia, Meng Wang, Chao Zhang, Jin Wang, Jian-Qing MiState Key Laboratory of Medical Genomics, Shanghai Institute of Hematology, Rui Jin Hospital Affiliated to Shanghai Jiao Tong University (SJTU) School of Medicine, Shanghai

Read publication here

100-spdbruker-timstof-ht
Targeting cancer-derived extracellular vesicles by combining CD147 inhibition with tissue factor pathway inhibitor for the management of urothelial cancer cells2024Vijay Kumar Boddu, Piet Zamzow, Mario Wolfgang Kramer, Axel S. Merseburger, Sivahari Prasad Gorantla, Matthias Klinger, Lena Cramer, Thorben Sauer, Timo Gemoll, Nikolas von Bubnoff, Frank Gieseler & Masoud DarabiDepartment of Hematology and Oncology, Section for Experimental Oncology, University Hospital Schleswig-Holstein, Lübeck, Germany,

Read publication here

15-spd extended-method
Comparative proteomic analysis of the changes in mare milk associated with different lactation stages and management systems2024Ana Blanco-Doval, Mikel Azkargorta, Ibon Iloro, Jabier Beaskoetxea, Felix Elortza, Luis Javier R. Barron, Noelia AldaiLactiker Research Group, Department of Pharmacy and Food Sciences, University of the Basque Country (UPV/EHU), Vitoria-Gasteiz, Spain

Read publication here

30-spdtimstof-pro
DYRKP kinase regulates cell wall degradation in Chlamydomonas by inducing matrix metalloproteinase expression2024Minjae Kim, Gabriel Lemes Jorge, Moritz Aschern, Stéphan Cuiné, Marie Bertrand,Malika Mekhalfi, Jae-Seong Yang, Jay J. Thelen, Fred Beisson, Gilles Peltier, and Yonghua Li-BeissonCEA, CNRS, Aix-Marseille University, Institute of Biosciences and Biotechnologies of Aix9 Marseille (BIAM),Saint-Paul-lez-Durance, France

Read publication here

timstof-pro-2
Personalized Molecular Signatures of Insulin Resistance and Type 2 Diabetes2024Jeppe Kjærgaard Larsen, Ben Stocks, John Henderson, Daniel Andersson, Jesper Bäckdah, Daniel Eriksson-Hogling, Jacob V. Stidsen, Kei Sakamoto, Kurt Højlund, Mikael Rydén, Juleen R. Zierath, Anna Krook, Atul S. DeshmukhNovo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark

Read publication here

30-spdtimstof-pro-2
STREAMLINED PROTEOME-WIDE IDENTIFICATION OF DRUG TARGETS INDICATES ORGAN-SPECIFIC ENGAGEMENT2024Tanveer Singh Batth, Marie Locard-Paulet, Nadezhda T. Doncheva, Blanca Lopez Mendez, Lars Juhl Jensen, and Jesper Velgaard OlsenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark

Read publication here

30-spdthermo-orbitrap-exploris-480
Phosphoproteomic investigation of targets of protein phosphatases in EGFR signaling2024Akihiro Eguchi, Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

Read publication here

60-spdthermo-orbitrap-exploris-480
Fragment ion intensity prediction improves the identification rate of non-tryptic peptides in timsTOF2024Charlotte Adams, Wassim Gabriel, Kris Laukens, Mario Picciani, Mathias Wilhelm, Wout Bittremieux, Kurt BoonenDepartment of Computer Science, University of Antwerp, Antwerp, Belgium

Read publication here

100-spdtimstof-pro
Proximity labeling proteomics reveals Kv1.3 potassium channel immune interactors in microglia2024Christine A. Bowen, Hai M. Nguyen, Young Lin, Pritha Bagchi, Aditya Natu, Claudia Espinosa-Garcia, Erica Werner, Prateek Kumar, Brendan R. Tobin, Levi Wood, Victor Faundez, Heike Wulff, Nicholas T. Seyfried, Srikant RangarajuCenter for Neurodegenerative Diseases, Emory University, Atlanta, GA, USA,

Read publication here

15-spd 30-spdthermo-q-exactive-plus-hybrid-quadrupole-orbitrap
Ultra-fast label-free quantification and comprehensive proteome coverage with narrow-window data-independent acquisition2024Amelia C. Peterson, Florian Harking, Ole Østergaard, Rasmus Rydbirk, Susana Aznar, Hamish Stewart, Yue Xuan, Daniel Hermanson, Stevan Horning, Christian Hock, Alexander Makarov, Vlad Zabrouskov & Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark,

Read publication here

30-spdthermo-orbitrap-astral thermo-orbitrap-exploris-480
Refining Spatial Proteomics by Mass Spectrometry: An Efficient Workflow Tailored for Archival Tissue2024Rune Daucke, Charlotte V. Rift, Nicolai S. Bager, Kartikey Saxena, Peter R. Koffeldt, Jakob Woessmann, Valdemaras Petrosius, Eric Santoni-Rugiu, Bjarne W. kristensen, Pia Klausen & Erwin M. SchoofDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark

Read publication here

whisper-20spdthermo-orbitrap-eclipse-tribid
Homo sapiens reached the higher latitudes of Europe by 45,000 years ago2024Michael Hein, Sahra Talamo, Lukas Wacker, Harald Meller, Holger Dietl, Jörg Orschiedt, Jesper V. Olsen, Hugo Zeberg, Kay Prüfer, Johannes Krause, Matthias Meyer, Frido Welker, Shannon P. McPherron, Tim Schüler & Jean-Jacques HublinMax Planck Institute for Evolutionary Anthropology, Leipzig, Germany

Read publication here

200-spdthermo-orbitrap-exploris-480
The Gárdos Channel and Piezo1 Revisited: Comparison between Reticulocytes and Mature Red Blood Cells2024Min Qiao, Carmen Van der Zwaan, Maria Giustina Rotordam,Thomas John, Laura Hertz, Arjan J. Hoogendijk, Nadine Becker, Christian Wagner, Marieke Von Lindern, Stephane Egee, Emile Van den Akker and Lars KaestnerTheoretical Medicine and Biosciences, Campus University Hospital, Saarland University, Homburg, Germany

Read publication here

30-spdbruker-timstof-ht
Activity-Guided Proteomic Profiling of Proteasomes Uncovers a Variety of Active (And Inactive) Proteasome Species2024Manisha Priyadarsini Sahoo, Tali Lavy, Noam Cohen, Indrajit Sahu & Oded KleifeldFaculty of Biology, Technion-Israel Institute of Technology, Technion City, Haifa, Israel,

Read publication here

thermo-orbitrap-exploris-480 thermo-q-exactive-hf
The loss of the PDIM/PGL virulence lipids causes differential secretion of ESX-1 sub-strates in Mycobacterium marinum2024Bradley S. Jones, Daniel D. Hu, Kathleen R. Nicholson, Rachel M. Cronin, Matthew M. Champion and Patricia A. ChampionDepartment of Biological Sciences, Eck Institute for Global Health, Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana, United States

Read publication here

15-spdtimstof-pro
Implementation of pupylation-based proximity labelling in plant biology reveals regulatory factors in cellulose biosynthesis2024Shuai Zheng, Ouda Khammy, Lise Charlotte Marie Noack, Andreas De Meyer, Ghazanfar Abbas Khan, Nancy De Winne, Dominique Eeckhout, Daniel van Damme, Staffan PerssonCopenhagen Plant Science Center, Department of Plant & Environmental Sciences, University of Copenhagen, Frederiksberg C, Denmark

Read publication here

30-spdtimstof-pro
A macroevolution-inspired approach to reveal novel antibiotic resistance mechanisms2024Luiz Pedro de Carvalho, Fernanda Subtil, Teresa Machado, Holly Douglas, Joanna Kirkpatrick, Mark Skehel & Acely Garza-GarciaThe Herbert Wertheim UF Scripps Institute, FL, United States

Read publication here

thermo-orbitrap-fusion-lumos
Differential expression of haptoglobin in individuals at clinical high risk of psychosis and its association with global functioning and clinical symptoms2024Kieran Wynne, Carrie E. Bearden, Scott W. Woods, Barbara Cornblatt, Daniel Mathalon, William Stone, Tyrone D. Cannon, Jean Addington, Kristin S. Cadenhead, Diana Perkins, Clark Jeffries, David CotterDepartment of Psychiatry, Royal College of Surgeons in Ireland, Dublin, Ireland

Read publication here

timstof-pro
Increased Cholesterol Synthesis Drives Neurotoxicity in Patient Stem Cell-Derived Model of Multiple Sclerosis2024Cory M. Willis, Luca Peruzzotti-Jametti, Valentina Fossati, Frank Edenhofer, Tommaso Leonardi, Christian Frezza, Irina Mohorianu, Angelo D’Alessandro, and Stefano PluchinoDepartment of Clinical Neurosciences and NIHR Biomedical Research Centre, University of Cambridge, Cambridge, UK

Read publication here

timstof-pro
Proteomic Biomarkers for the Prediction of Transition to Psychosis in Individuals at Clinical High Risk: A Multi-cohort Model Development Study2024Carrie E Bearden, Kristin S Cadenhead, Jean Addington, Elaine F Walker, Tyrone D Cannon, Mary Cannon, Pat McGorry, Paul Amminger, Gerard Cagney, Barnaby Nelson, Clark Jeffries, Diana Perkins, David R CotterDepartment of Psychiatry, Royal College of Surgeons in Ireland, University of Medicine and Health Sciences, Dublin, Ireland

Read publication here

timstof-pro
Plasma Proteomic Analysis Based on 4D-DIA Evaluates the Clinical Response to Imrecoxib in the Early Treatment of Osteoarthritis2024López-Gómez J, Villareal L, Andrés M, Ponte I, Xicoy B, Zamora L, Vilaseca M, Roque ABiochemistry and Molecular Biology Department, Biosciences Faculty. Universitat Autònoma de Barcelona, Spain,

Read publication here

15-spdthermo-orbitrap-eclipse-tribid thermo-orbitrap-lumos
Mechanism of chaperone coordination during cotranslational protein folding in bacteria2024Alžběta Roeselová, Sarah L. Maslen, Santosh Shivakumaraswamy, Grant A. Pellowe, Steven Howell, Dhira Joshi, Joanna Redmond, Svend Kjaer, J. Mark Skehel and David BalchinProtein Biogenesis Laboratory, The Francis Crick Institute, London, UK

Read publication here

30-spdthermo-orbitrap-fusion-lumos
The Molecular Twin artificial-intelligence platform integrates multi-omic data to predict outcomes for pancreatic adenocarcinoma patients2024Pranav Singh, Darya Filippova, Grant Dagliyan, Cristina R. Ferrone, Lei Zheng, Jason H. Moore, Warren Tourtellotte, Jennifer E. Van Eyk & Dan TheodorescuSamuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA

Read publication here

thermo-orbitrap-exploris-480
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications2024Claudia Ctortecka, Natalie M. Clark, Brian Boyle, Anjali Seth, D. R. Mani, Namrata D. Udeshi & Steven A. CarrBroad Institute of MIT and Harvard, Cambridge, MA, USA

Read publication here

whisper-40spdbruker-timstof-scp
The CDK Pho85 inhibits Whi7 Start repressor to promote cell cycle entry in budding yeast2024Cristina Ros-Carrero, Mihai Spiridon-Bodi, J Carlos Igual and Mercè Gomar-AlbaInstitut de Biotecnologia i Biomedicina (BIOTECMED) and Departament de Bioquímica i Biologia Molecula rUniversitat de València, Burjassot Spain

Read publication here

bruker-timstof-flex
Characterization of MdpS: an in-depth analysis of a MUC5B-degrading protease from Streptococcus oralis2024Fredrik Leo, Rolf Lood, Kristina A. Thomsson, Jonas Nilsson, Gunnel Svensäter, Claes WickströmDepartment of Oral Biology and Pathology, Faculty of Odontology, Malmö University, Malmö, Sweden

Read publication here

whisper-20spdthermo-q-exactive-hf-x
The loss of the PDIM/PGL virulence lipids causes differential secretion of ESX-1 substrates in Mycobacterium marinum2024Bradley S. Jones, Daniel D. Hu, Kathleen R. Nicholson, Rachel M. Cronin, Matthew M. Champion, and Patricia A. ChampionDepartment of Biological Sciences, Eck Institute for Global Health, Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana

Read publication here

15-spdtimstof-pro
Proteomics of colorectal tumors identifies the role of CAVIN1 in tumor formation and progression2024Jesper Olsen, Ana Martinez-Val, Leander van der Hoeven, Dorte Bekker-Jensen, Margarita Jørgensen, Jesper Nors, Giulia Franciosa, Claus Andersen, Jesper BramsenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark

Read publication here

60-spdthermo-orbitrap-exploris-480
timsTOF HT Improves Protein Identification and Quantitative Reproducibility for Deep Unbiased Plasma Protein Biomarker Discovery2024Chinmay Belthangady, John Blume, Jessica K. Chan, Guillermo Flores-Campuzano, Yuntao Hu, Manway Liu, Mark A. Marispini, Megan G. Mora, Saividya Ramaswamy, Purva Ranjan, Preston B. Williams, Robert J. X. Zawada, Philip Ma, and Bruce E. WilcoxPrognomiQ Inc., San Mateo, California, United States, , ,

Read publication here

100-spd 30-spd 60-spdbruker-timstof-ht timstof-pro-2
Kinase inhibitor pulldown assay (KiP) for clinical proteomics2024Lester and Sue Smith Breast Center and Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USALester and Sue Smith Breast Center and Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX, USA

Read publication here

30-spdthermo-orbitrap-exploris-480
Cerebrospinal fluid shotgun proteomics identifies distinct proteomic patterns in cerebral amyloid angiopathy rodent models and human patients2024Marc Vervuurt, Joseph M. Schrader, Anna M. de Kort, Iris Kersten, Hans J. C. T. Wessels, Catharina J. M. Klijn, Floris H. B. M. Schreuder, H. Bea Kuiperij, Jolein Gloerich, William E. Van Nostrand & Marcel M. VerbeekDepartment of Neurology, Donders Institute for Brain, Cognition and Behaviour, 830 TML, Radboud University Medical Center, 6500 HB, Nijmegen, The Netherlands

Read publication here

30-spdtimstof-pro-2
Full Mass Range ΦSDM Orbitrap Mass Spectrometry for DIA Proteome Analysis2024Sophia Steigerwald, Ankit Sinha, Kyle L. Fort, Wen-Feng Zeng, Lili Niu, Christoph Wichmann, Arne Kreutzmann, Daniel Mourad, Konstantin Aizikov, Dmitry Grinfeld, Alexander Makarov, Matthias Mann, Florian MeierDepartment Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany, ,

Read publication here

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Multi-omics profiling with untargeted proteomics for blood-based early detection of lung cancer2024Madhuvanthi Ramaiah, Saividya Ramaswamy, Purva Ranjan, Guanhua Shu, Peter Spiro, Benjamin Ta, Dijana Vitko, Jacob Waiss, Zachary Yanagihara, Robert Zawada, Jimmy Yi Zeng, Susan Zhang, James Yee, John E. Blume, Chinmay Belthangady, Bruce Wilcox, Philip MaPrognomiQ, Inc., San Mateo, CA, USA

Read publication here

60-spdbruker-timstof-ht
Next-Generation Proteomics of Brain Extracellular Vesicles in Schizophrenia Provide New Clues on the Altered Molecular Connectome2024Cristina Lorca, María Fernández-Rhodes, Jose Antonio Sánchez Milán, María Mulet, Félix Elortza, Alfredo Ramos-Miguel, Luis F. Callado, J. Javier Meana, Maria Mur, Iolanda Batalla, Elisabet Vilella, Aida Serra and Xavier Gallart-PalauBiomedical Research Institute of Lleida Dr. Pifarré Foundation (IRBLLEIDA), Neuroscience Area, +Pec Proteomics Research Group (+PPRG), University Hospital Arnau de Vilanova,Lleida, Spain

Read publication here

15-spdtimstof-pro
Localization, traffic and function of Rab34 in adipocyte lipid and endocrine functions2024Andrés Trávez, Carmen Tercero-Alcázar, Alejandro Correa-Sáez, María Jesús González-Rellán, Oriol A. Rangel-Zúñiga, Amaia Rodríguez, Antonio Membrives, Gema Frühbeck, Rubén Nogueiras, Marco A. Calzado, Rocío Guzmán-Ruiz & María M. MalagónDepartment of Cell Biology, Physiology, and Immunology, Maimonides Institute for Biomedical Research of Córdoba (IMIBIC), University of Córdoba (UCO), Reina Sofía University Hospital (HURS), Córdoba, Spain

Read publication here

bruker-timstof-flex
FOXO1-mediated lipid metabolism maintains mammalian embryos in dormancy2024Vera A. van der Weijden, Maximilian Stötzel, Dhanur P. Iyer, Beatrix Fauler, Elzbieta Gralinska, Mohammed Shahraz, David Meierhofer, Martin Vingron, Steffen Rulands, Theodore Alexandrov, Thorsten Mielke & Aydan Bulut-KarsliogluStem Cell Chromatin Group, Department of Genome Regulation, Max Planck Institute for Molecular Genetics, Berlin, Germany

Read publication here

whisper-40spdthermo-q-exactive-hf
Direct translation of incoming retroviral genomes2024Julia Köppke, Luise-Elektra Keller, Michelle Stuck, Nicolas D. Arnow, Norbert Bannert, Joerg Doellinger & Oya CingözRobert Koch Institute, Department of Infectious Diseases, Unit of Sexually Transmitted Bacterial Pathogens and HIV, Berlin, Germany

Read publication here

30-spdbruker-timstof-ht
Single cell proteomics by mass spectrometry reveals deep epigenetic insight and new targets of a class specific histone deacetylase inhibitor2024Benjamin C. OrsburnThe Department of Pharmacology and Molecular Sciences, the Johns Hopkins University School of Medicine, Baltimore, MD, USA, , , , ,

Read publication here

100-spd 200-spd 30-spd 300-spd 500-spd 60-spdbruker-timstof-scp
Calcium carbonate polymorph selection in fish otoliths: A key role of phosphorylation of Starmaker-like protein2024Marta Kalka, Klaudia Bielak, Maciej Ptak, Jarosław Stolarski, Piotr Dobryszycki, Magdalena WojtasWroclaw University of Science and Technology, Faculty of Chemistry, Department of Biochemistry, Molecular Biology and Biotechnology, Wrocław, Poland

Read publication here

thermo-orbitrap-exploris-480
Trauma Induces Intravascular Hemolysis, Exacerbated by RBC Transfusion and Associated with Disrupted Arginine-Nitric Oxide Metabolism2024Ernest E. Moore, Angela Sauaia, Monika Dzieciatkowska, William Hallas, Otto Thielen, Margot DeBot, Alexis Cralley, Ian LaCroix, Christopher Erickson, Sanchayita Mitra, Anirban Banerjee, Kenneth Jones, and Kirk C. HansenUniversity of Colorado Denver, School of Medicine, Department of Biochemistry and Molecular Genetics, Aurora, CO

Read publication here

timstof-pro
Paracrine cross-talk between human adipose tissue-derived endothelial cells and perivascular cells accelerates the endothelialization of an electrospun ionomeric polyurethane scaffold2023Jeremy A. Antonyshyn, Kate D. MacQuarrie, Meghan J. McFadden, Anthony O. Gramolini, Stefan O.P. Hofer, J. Paul SanterreInstitute of Biomedical Engineering, University of Toronto, Toronto, Canada

Read publication here

15-spdthermo-q-exactive-plus
Region-Directed Enzyme Immobilization through Engineering Protein Surface with Histidine Clusters2023Nicoll Zeballos, Natalia Comino, Daniel Andrés-Sanz, Javier Santiago-Arcos, Mikel Azkargorta, Felix Elortza, Eleftheria Diamanti, and Fernando López-GallegoCenter for Cooperative Research in Biomaterials (CIC biomaGUNE), Basque Research and Technology Alliance (BRTA), San Sebastián, Spain

Read publication here

timstof-pro
Modeling the simultaneous dynamics of proteins in blood plasma and the cerebrospinal fluid in human in vivo2023Pierre Giroux, Jérôme Vialaret, Jana Kindermans, Audrey Gabelle, Luc Bauchet, Christophe Hirtz, Sylvain Lehmann, Jacques ColingeUniversité de Montpellier, Montpellier, France

Read publication here

60-spdbruker-timstof-ht
Multicenter Collaborative Study to Optimize Mass Spectrometry Workflows of Clinical Specimen2023Alexander M. Bernhardt, Lisa Schweizer, Vincent Albrecht, Daniel Teupser, Axel Imhof, Bernhard Kuster, Stefan F. Lichtenthaler, Matthias Mann, Jürgen Cox, and Stefanie M. HauckMetabolomics and Proteomics Core (MPC), Helmholtz Zentrum München,German Research Center for Environmental Health (GmbH), Munich, Germany, , , ,

Read publication here

60-spdthermo-orbitrap-exploris-480 thermo-orbitrap-fusion-lumos thermo-q-exactive-hf thermo-q-exactive-hf-x timstof-pro
Serine-129 phosphorylation of α-synuclein is an activity-dependent trigger for physiologic protein-protein interactions and synaptic function2023Lina Wang, Dube Dheeraj Prakashchand, Nicholas P. Boyer, Veronica M. Saia-Cereda, Kristen Branes-Guerrero, Donald P. Pizzo, Pritha Bagchi, V.S. Sundar, Yong Tang, Utpal Das, David A. Scott, Padmini Rangaman, Yuki Ogawa, Subhojit RoyDepartment of Pathology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, USA

Read publication here

15-spdthermo-q-exactive-plus-hybrid-quadrupole-orbitrap
In vivo protein turnover rates in varying oxygen tensions nominate MYBBP1A as a mediator of the hyperoxia response2023Erica Stevenson, Yiwen R. Chen, Nabora S. Reyes, Tien Peng, Michael A. Matthay, Michela Traglia, Alexander R. Pico, Daniel F. Jarosz, Abigail Buchwalter, Sina Ghaemmaghami, Danielle L. Swaney, Isha H. JainInstitute of Cardiovascular Disease, Gladstone Institutes, San Francisco, CA, USA

Read publication here

60-spdtimstof-pro-2
A biotin targeting chimera (BioTAC) system to map small molecule interactomes in situ2023Andrew J. Tao, Jiewei Jiang, Gillian E. Gadbois, Pavitra Goyal, Bridget T. Boyle, Elizabeth J. Mumby, Samuel A. Myers, Justin G. English & Fleur M. FergusonDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA, USA

Read publication here

30-spdtimstof-pro-2
Comparative proteomic analysis of human milk fat globules and paired membranes and mouse milk fat globules identifies core cellular systems contributing to mammary lipid trafficking and secretion2023Jayne F. Martin Carli, Monika Dzieciatkowska, Teri L. Hernandez, Jenifer Monks, James L. McManamanDivision of Reproductive Sciences, Department of Obstetrics and Gynecology, University of Colorado Anschutz Medical Campus, Aurora, CO, United States

Read publication here

bruker-timstof-pro
Cryopreservation of highly extended pig spermatozoa remodels its proteome and counteracts polyspermic fertilization in vitro2023Inmaculada Parrilla, Josep M. Cambra, Cristina Cuello, Heriberto Rodriguez-Martinez, Maria A. Gil, Emilio A. MartinezDepartment of Medicine and Animal Surgery, International Excellence Campus for Higher Education and Research “Campus Mare Nostrum,”, University of Murcia, Murcia, Spain

Read publication here

60-spdbruker-timstof-flex
Proteomic comparison between non‐purified cerebrospinal fluid and cerebrospinal fluid‐derived extracellular vesicles from patients with Alzheimer’s, Parkinson’s and Lewy body dementia2023Yael Hirschberg, Natalia Valle‐Tamayo, Oriol Dols‐Icardo, Sebastiaan Engelborghs, Bart Buelens, Roosmarijn E. Vandenbroucke, Yannick Vermeiren, Kurt Boonen, and Inge MertensHealth Unit, Flemish Institute for Technological Research (VITO), Mol Belgium

Read publication here

30-spdbruker-timstof-pro
Fully automated workflow for integrated sample digestion and Evotip loading enabling high-throughput clinical proteomics2023Anders H. Kverneland, Florian Harking, Joel Mario Vej-Nielsen, Magnus Huusfeldt, Dorte B. Bekker-Jensen, Inge Marie Svane, Nicolai Bache, Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark, ,

Read publication here

100-spd 30-spd 60-spdthermo-orbitrap-exploris-480
Immunopeptidomics in the Era of Single-Cell Proteomics2023Rupert L. Mayer and Karl MechtlerResearch Institute of Molecular Pathology, Vienna BioCenter, Vienna, Austria, , ,

Read publication here

whisper-40spdbruker-timstof-scp bruker-timstof-ultra thermo-orbitrap-astral thermo-q-exactive-hf
IMBAS-MS discovers organ-specific HLA peptide patterns in plasma2023Maria Wahle, Marvin Thielert, Maximilian Zwiebel, Patricia Skowronek, Wen-Feng Zeng, Matthias MannDepartment Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany, , ,

Read publication here

15-spd 30-spd 60-spd whisper-40spdbruker-timstof-ultra
An automated and fast sample preparation workflow for laser microdissection guided ultrasensitive proteomics2023Anuar Makhmut, Di Qin, David Hartlmayr, Anjali Seth, Fabian CosciaMax-Delbrück-Center for Molecular Medicine in the Helmholtz Association, Spatial Proteomics Group, Berlin, Germany

Read publication here

whisper-40spdbruker-timstof-scp
INPP5D regulates inflammasome activation in human microglia2023Nancy Ashour, Mariko Taga, Gizem Terzioglu, Masashi Fujita, Seeley B. Fancher, Alina Sigalov, Courtney R. Benoit, Hyo Lee, Matti Lam, Nicholas T. Seyfried, David A. Bennett, Philip L. De Jager, Vilas Menon & Tracy L. Young-PearseAnn Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA, USA

Read publication here

60-spdthermo-orbitrap-eclipse-tribid
Multicenter Collaborative Study to Optimize Mass Spectrometry Workflows of Clinical Specimens2023Stephan Eckert, Stephan A. Müller, Stephan Breimann, Pieter Giesbertz, Alexander M. Bernhardt, Lisa Schweizer, Vincent Albrecht, Daniel Teupser, Axel Imhof, Bernhard Kuster, Stefan F. Lichtenthaler, Matthias Mann, Jürgen Cox, and Stefanie M. HauckMetabolomics and Proteomics Core (MPC), Helmholtz Zentrum München,German Research Center for Environmental Health (GmbH), Munich, Germany,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Novel Assay for Quantification of Free Light Chain (FLC) Dimers in Serum of Patients with Plasma Cell Dyscrasias2023Mariya Liyasova PhD, Michael Slade MDMSCI, Julie Fortier PhD, Ravi Vij MD MBA, Mark Fiala PhD, Liqiang Yang PhD, Bin Ma PhDRapid Novor Inc., Kitchener, Canada

Read publication here

thermo-orbitrap-exploris-480
Diagnostic Utility of Proteogenomic Analysis for Inherited Bone Marrow Failure Syndrome2023Manabu Wakamatsu MDPhD, Hideki Muramatsu MD PhD, Hironori Sato MDPhD, Masaki Ishikawa, Daisuke Nakajima, Ryo Konno, Yusuke Kawashima, Motoharu Hamada MDPhD, Yusuke Okuno MD PhD, Osamu Ohara, Yoshiyuki Takahashi MD PhDDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan

Read publication here

thermo-orbitrap-exploris-480
High-throughput proteomics uncovers exercise training and type 2 diabetes–induced changes in human white adipose tissue2023Jeppe Kjærgaard Larsen, Rikke Kruse, Navid Sahebkhtiari, Roger Moreno-Justicia, Gerard Gomez Jorba, Maria H. Petersen, Martin E. De Almeida, Niels Ørtenblkad, Atul S. Deshmukh, Kurt HøjlundSteno Diabetes Center Odense, Odense University Hospital, Odense C, Denmark

Read publication here

30-spdthermo-orbitrap-exploris-480
High-throughput and scalable single cell proteomics identifies over 5000 proteins per cell2023Zilu Ye, Pierre Sabatier, Leander van der Hoeven, Teeradon Phlairaharn, David Hartlmayr, Fabiana Izaguirre, Anjali Seth, Hiren J. Joshi, Dorte B. Bekker-Jensen, Nicolai Bache, Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark,

Read publication here

whisper-40spd whisper-80-spdthermo-orbitrap-astral
BioE3 identifies specific substrates of ubiquitin E3 ligases2023Orhi Barroso-Gomila, Laura Merino-Cacho, Veronica Muratore, Coralia Perez, Vincenzo Taibi, Elena Maspero, Mikel Azkargorta, Ibon Iloro, Fredrik Trulsson, Alfred C. O. Vertegaal, Ugo Mayor, Felix Elortza, Simona Polo, Rosa Barrio & James D. SutherlandCenter for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Derio, Spain

Read publication here

30-spdtimstof-pro
Sensitive Blood-Based Detection of HIV-1 and Mycobacterium tuberculosis Peptides for Disease Diagnosis by Immuno-Affinity Liquid Chromatography–Tandem Mass Spectrometry: A Method Development and Proof-of-Concept Study2023Lin Li, Christopher J Lyon, Sylvia M LaCourse, Wenshu Zheng, Joshua Stern, Jaclyn N Escudero, Wilfred Bundi Murithi, Lilian Njagi, Grace John-Stewart, Thomas R Hawn, Videlis Nduba, Wael Abdelgaliel, Thomas Tombler, David Horne, Li Jiang, Tony Y HuCenter for Cellular and Molecular Diagnostics, Department of Biochemistry and Molecular Biology, School of Medicine, Tulane University, New Orleans, LA, United States

Read publication here

thermo-altis-triple-quadrupole
Mapping cardiac remodeling in chronic kidney disease2023Giulia Franciosa, Aurelien Dugourd, Julio Saez-Rodriguez, Sabine Neuss, Michael Lehrke, Peter Boor, Claudia Goettesch, Jesper V. Olsen, Thimoteus Speer, Tzong-Shi Lu, Kennth Lim, Jürgen Floege, Laura Denby, Ivan Costa, Rafael KramannClinic for Renal and Hypertensive Disorders, Rheumatological and Immunological Disease, University Hospital of the RWTH Aachen, Aachen, Germany

Read publication here

30-spdthermo-orbitrap-exploris-480
Systematic optimization of automated phosphopeptide enrichment for high-sensitivity phosphoproteomics2024Patricia Bortel, Ilaria Piga, Claire Koenig, Christopher Gerner, Ana Martinez del Val, Jesper V. OlsenDepartment of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Austria

Read publication here

whisper-40spdthermo-orbitrap-exploris-480
Deep topographic proteomics of a human brain tumour2023Simon Davis, Connor Scott, Janina Oetjen, Philip D. Charles, Benedikt M. Kessler, Olaf Ansorge & Roman FischerTarget Discovery Institute, Centre for Medicines Discovery, Nuffield Department of Medicine, University of Oxford

Read publication here

whisper-40spdbruker-timstof-pro
Loss of the KN Motif and AnKyrin Repeat Domain 1 (KANK1) Leads to Lymphoid Compartment Dysregulation in Murine Model2023Marwa Almosailleakh, Sofia Bentivegna, Samuele Narcisi, Sébasitien J. Benquet, Linn Gillberg, Carmen P. Montaño-Almendras, Simonas Savickas, Erwin M. Schoof, Amelie Wegener, Hérve Luche, Henrik E. Jensen, Christophe Côme & Kirsten GrønbækDepartment of Hematology, Rigshospitalet, 2100 Copenhagen, Denmark

Read publication here

Instrumentation at the leading edge of proteomics2023Trenton M. Peters-Clarke, Joshua J. Coon, Nicholas M. RileyDepartment of Chemistry, University of Washington, Seattle, WA, USA

Read publication here

The social and structural architecture of the yeast protein interactome2023André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau & Matthias MannMax-Planck Institute of Biochemistry, Martinsried, Germany

Read publication here

60-spdtimstof-pro
Antitumor activity of AZD0754, a dnTGFβRII-armored, STEAP2-targeted CAR-T cell therapy, in prostate cancer2023Philip L. Martin, Clare E. Hoover, Kenesha Riley, Steve M. Sweet, David Chain, Yeoun Jin Kim, Eric Tu, Nathalie Harder, Sandrina Phipps, Melissa Damschroder, Ryan N. Gilbreth, Mark Cobbold, Gordon Moody, and Emily E. BoscoEarly Oncology Research, Biologics Engineering and Oncology Translational Medicine, Oncology R&D, AstraZeneca, Gaithersburg, Maryland, USA

Read publication here

30-spdthermo-orbitrap-exploris-480
Sensitive and Specific Global Cell Surface N-Glycoproteomics Shows Profound Differences Between Glycosylation Sites and Subcellular Components2023Noortje de Haan, Ming Song, Oliver C. Grant, Zilu Ye, Fawzi Khoder Agha, Mikkel Koed Møller Aasted, Robert J. Woods, Sergey Y. Vakhrushev, and Hans H. WandallCopenhagen Center for Glycomics, University of Copenhagen, Copenhagen, Denmark

Read publication here

30-spdthermo-orbitrap-exploris-480
Dynamic extracellular proximal interaction profiling reveals Low-Density Lipoprotein Receptor as a new Epidermal Growth Factor signaling pathway component2023Rasha Al Mismar, Payman Samavarchi-Tehrani, Brendon Seale, Vesal Kasmaeifar, Claire E. Martin, Anne-Claude GingrasLunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Sinai Health, Toronto, Canada,

Read publication here

30-spd 60-spdtimstof-pro-2
Synaptic involvement of the human amygdala in Parkinson’s disease2023Sandra Villar-Conde, Veronica Astillero-Lopez, Melania Gonzalez-Rodriguez, Daniel Saiz-Sanchez, Alino Martinez-Marcos, Isabel Ubeda-Banon, Alicia Flores-CuadradoNeuroplasticity and Neurodegeneration Group, CRIB, Faculty of Medicine of Ciudad Real, University of Castilla-La Mancha (UCLM), Spain

Read publication here

60-spdtimstof-pro
Mass spectrometry quantifies target engagement for a KRASG12C inhibitor in FFPE tumor tissue2023Andrew G. Chambers, David C. Chain, Steve M. Sweet, Zifeng Song, Philip L. Martin, Matthew J. Ellis, Claire Rooney and Yeoun Jin KimEarly Oncology, AstraZeneca, One MedImmune Way, Gaithersburg, MD 20878, USA

Read publication here

30-spdthermo-orbitrap-fusion-lumos
Comparing extraction method efficiency for high-throughput palaeoproteomic bone species identification2023Florian S. Harking, Alberto J. Taurozzi, Zandra Fagernäs, Ricardo M. Godinho, Geoff M. Smith, Marcel Weiss, Tim Schüler, Shannon P. McPherron, Harald Meller, João Cascalheira, Nuno Bicho, Jesper V. Olsen, Jean-Jacques Hublin & Frido WelkerGlobe Institute, University of Copenhagen, Copenhagen, Denmark

Read publication here

60-spdthermo-orbitrap-exploris-480
Interplay between Cultured Human Osteoblastic and Skeletal Muscle Cells: Effects of Conditioned Media on Glucose and Fatty Acid Metabolism2023Ngoc Nguyen Lunde, Nimo Mukhtar Mohamud Osoble, Andrea Dalmao Fernandez, Alfreda S. Antobreh, Abbas Jafari, Sachin Singh, Tuula A. Nyman, Arild C. Rustan, Rigmor Solberg and G. Hege ThoresenSection for Pharmacology and Pharmaceutical Biosciences, Department of Pharmacy, University of Oslo, Norway

Read publication here

30-spdthermo-q-exactive-hf
Ventricular CSF proteomic profiles and predictors of surgical treatment outcome in chronic hydrocephalus2023Nina Rostgaard, Markus Harboe Olsen, Sara Diana Lolansen, Nicolas Hernandez Nørager, Peter Plomgaard, Nanna MacAulay & Marianne JuhlerDepartment of Neurosurgery, The Neuroscience Centre, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark

Read publication here

60-spdthermo-orbitrap-exploris-480
A chemoproteomic platform for selective deubiquitinase inhibitor discovery2023Rosa Cookson, Aini Vuorinen, Jonathan Pettinger, Cassandra R. Kennedy, Joanna M. Kirkpatrick, Rachel E. Peltier-Heap, Andrew Powell, Ambrosius P. Snijders, Mark Skehel, David House, Katrin Rittinger, and Jacob T. BushCrick-GSK Biomedical LinkLabs, GSK, Gunnels Wood Road, Stevenage, Hertfordshire, UK,

Read publication here

30-spd 60-spdthermo-orbitrap-fusion-lumos
Species-specific metabolic reprogramming in human and mouse microglia during inflammatory pathway induction2023Alejandro Marmolejo-Garza, Marina Trombetta-Lima, Asmaa Oun, Jasmijn Hunneman, Tingting Chen, Jari Koistinaho, Sarka Lehtonen, Arjan Kortholt, Justina C. Wolters, Barbara M. Bakker, Bart J. L. Eggen, Erik Boddeke & Amalia DolgaDepartment of Molecular Pharmacology, Faculty of Science and Engineering, Groningen Research Institute of Pharmacy, Behavioral and Cognitive Neurosciences (BCN), University of Groningen, Groningen, The Netherlands

Read publication here

30-spdthermo-orbitrap-exploris-480
Identification of Plasma Biomarkers from Rheumatoid Arthritis Patients Using an Optimized Sequential Window Acquisition of All THeoretical Mass Spectra (SWATH) Proteomics Workflow2023Liang Jin, Fei Wang, Xue Wang, Bohdan P. Harvey, Yingtao Bi, Chenqi Hu, Baoliang Cui, Anhdao T. Darcy, John W. Maull, Ben R. Phillips, Youngjae Kim, Gary J. Jenkins, Thierry R. Sornasse and Yu TianResearch & Development, AbbVie, North Chicago, IL, USA

Read publication here

60-spdtimstof-pro
Autoantibody binding and unique enzyme-substrate intermediate conformation of human transglutaminase 32023Julie Elisabeth Heggelund, Saykat Das, Jorunn Stamnaes, Rasmus Iversen & Ludvig M. SollidKG Jebsen Coeliac Disease Research Centre, Institute of Clinical Medicine, University of Oslo, Norway

Read publication here

30-spdthermo-q-exactive-hf
Müller glial cells located in the peripheral retina are more susceptible to high pressure: implications for glaucoma2023Xandra Pereiro, Noelia Ruzafa, Mikel Azkargorta, Felix Elorza, Arantxa Acera, António Francisco Ambrósio, Ana Raquel Santiago, Elena VecinoUniversity of the Basque Country: Universidad del Pais Vasco

Read publication here

60-spdtimstof-pro
Production in Nicotiana benthamiana of a thermotolerant glucose oxidase that shows enzybiotic activity against Escherichia coli and Staphylococcus aureus2023David Talens-Perales, María Nicolau-Sanus, Julia Marín-Navarro, Julio Polaina, José-Antonio DaròsInstitute of Molecular and Cellular Biology of Plants (Higher Council of Scientific Research-Universitat Politècnica de València), Valencia, Spain

Read publication here

100-spdbruker-timstof-flex
Postpartum defects in inflammatory response after gestational diabetes precede progression to type 2 diabetes: a nested case-control study within the SWIFT study2023Julie A.D. Van, Yihan Luo, Jayne S. Danska, Feihan Dai, Stacey E. Alexeeff, Erica P. Gunderson, Hannes Rost, Michael B. WheelerDepartment of Physiology, Faculty of Medicine, University of Toronto, Ontario, Canada

Read publication here

60-spdbruker-timstof-pro
Unlatching of the stem domains in the Staphylococcus aureus pore-forming leukocidin LukAB influences toxin oligomerization2023Juliana K. Ilmain, Sofya S. Perelman, Maria C. Panepinto, Irnov Irnov, Nicolas Coudray, Nora Samhadaneh, Alejandro Pironti, Beatrix Ueberheide, Damian C. Ekiert, Gira Bhabha, Victor J. TorresDepartment of Microbiology, New York University Grossman School of Medicine, New York, USA

Read publication here

15-spdthermo-q-exactive-hf
Direct isolation of small extracellular vesicles from human blood using viscoelastic microfluidics2023Yingchao Meng, Yanan Zhang, Marcel Bühler, Shuchen Wang, Mohammad Asghari, Alessandra Stürchler, Bogdan Mateescu, Tobias Weiss, Stavros Stavrakis, Andrew J. DemelloInstitute for Chemical and Bioengineering, Department of Chemistry and Applied Biosciences, Zürich, Switzerland

Read publication here

30-spdbruker-timstof-pro
Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome2023Constantin Ammar, Sophia C. Mädler, Andreas Metousis, Patricia Skowronek, Maria Wahle, Katherine Madden, Janine Gote-Schniering, Anna Semenova, Herbert B. Schiller, Edwin Rodriguez, Thierry M. Nordmann, Andreas Mund & Matthias MannProteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany,

Read publication here

30-spd whisper-40spdbruker-timstof-scp
MassSpecPreppy—An end-to-end solution for automated protein concentration determination and flexible sample digestion for proteomics applications2023Alexander Reder, Christian Hentschker, Leif Steil, Manuela Gesell Salazar, Elke Hammer, Vishnu M. Dhople, Thomas Sura, Ulrike Lissner, Hannes Wolfgramm, Denise Dittmar, Marco Harms, Kristin Surmann, Uwe Völker, Stephan MichalikInterfaculty Institute of Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Germany

Read publication here

30-spdtimstof-pro-2
Exploration of cell state heterogeneity using single-cell proteomics through sensitivity-tailored data-independent acquisition2023Pedro Aragon-Fernandez, Nil Üresin, Gergo Kovacs, Teeradon Phlairaharn, Benjamin Furtwängler, Jeff Op De Beeck, Sarah L. Skovbakke, Steffen Goletz, Simon Francis Thomsen, Ulrich auf dem Keller, Kedar N. Natarajan, Bo T. Porse & Erwin M. SchoofDepartment of Biotechnology and Biomedicine, Technical University of Denmark,

Read publication here

whisper-20spd whisper-40spd
Expanding the MAPPs Assay to Accommodate MHC-II Pan Receptors for Improved Predictability of Potential T Cell Epitopes2023Katharina Hartman, Guido Steiner, Michel Siegel, Cary M. Looney, Timothy P. Hickling, Katharine Bray-French, Sebastian Springer, Céline Marban-Doran, and Axel DucretRoche Pharma Research and Early Development, Roche Innovation Center Basel, Switzerland

Read publication here

whisper-40spdtimstof-pro-2
Exploring the benefits of differential mobility separation and SWATH data independent acquisition for complex proteomic sample analysis2023J.C.Yves Le Blanc, Eva Duchoslav, Lyle Burton, Steve Tate and Brad SchneiderSCIEX,

Read publication here

100-spd 200-spdsciex-tripletof-6600-ms-system
Heterogeneity of radial spokes structural components and associated enzymes in Tetrahymena cilia2023Marta Bicka, Corbin Black, Avrin Ghanaeian, Ewa Joachimiak, Anna Osinka, Sumita Majhi, Anna Konopka, Ewa Bulska, Khanh Huy Bui, Dorota WlogaLaboratory of Cytoskeleton and Cilia Biology, Nencki Institute of Experimental Biology of Polish Academy of Sciences, Warsaw, Poland

Read publication here

30-spdthermo-orbitrap-exploris-480
A dynamic bias in chromatin protein deposition at G-quadruplex sites2023Thamar Jessurun Lobo, Deng Chen, Martijn R. H. Zwinderman, Peter M Lansdorp, Frank J. Dekker, Victor GuryevEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands

Read publication here

30-spdthermo-orbitrap-exploris-480
Sex differences in brain protein expression and disease2023Yue Liu, Ekaterina S. Gerasimov, Selina M. Vattathil, Jiaqi Liu, David J. Cutler, Michael P. Epstein, Gabriëlla A. M. Blokland, Madhav Thambisetty, Juan C. Troncoso, Duc M. Duong, David A. Bennett, Allan I. Levey, Nicholas T. Seyfried, Thomas S. WingoDepartment of Human Genetics,Goizueta Alzheimer’s Disease Center, Emory University School of Medicine, Atlanta, GA, USA

Read publication here

60-spdthermo-orbitrap-eclipse-tribid
The potential of plasma HLA peptides beyond neoepitopes2023Maria Wahle, Marvin Thielert, Maximilian Zwiebel, Patricia Skowronek, Wen-Feng Zeng, Matthias MannDepartment Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany

Read publication here

whisper-40spdbruker-timstof-ultra
Comparative proteomics analysis in different stages of urothelial bladder cancer for identification of potential biomarkers: highlighted role for antioxidant activity2023Samira Tabaei, Mohammad Reza Haghshenas, Ali Ariafar, Kambiz Gilany, Allan Stensballe, Shirin Farjadian, Abbas GhaderiShiraz Institute for Cancer Research, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran

Read publication here

100-spdtimstof-pro-2
A micro-flow, high-pH, reversed-phase peptide fractionation and collection system for targeted and in-depth proteomics of low-abundance proteins in limiting samples2023Marta Zurawska, Mark Basik, Adriana Aguilar-Mahecha, Michal Dadlez, Dominik DomanskiMass Spectrometry Laboratory, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland

Read publication here

30-spdthermo-orbitrap-exploris-480
Proteogenomic analysis of chemo-refractory high- grade serous ovarian cancer2023Jiayi Ji, Seungyeul Yoo, Chenwei Lin, Uliana J. Voytovich, Yajue Huang, Sun-Hee Lee, Lindsay Bergan, Travis D. Lorentzen, Mehdi Mesri, Henry Rodriguez, Andrew N. Hoofnagle, Zachary T. Herbert, Alexey I. Nesvizhskii, Bing ZhangLester and Sue Smith Breast Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA

Read publication here

sciex-qtrap-6500
MassSpecPreppy – an end-to-end solution for automated protein concentration determination and flexible sample digestion for proteomics applications2023Alexander Reder, Christian Hentschker, Leif Steil, Manuela Gesell Salazar, Elke Hammer, Vishnu M. Dhople, Thomas Sura, Ulrike Lissner, Hannes Wolfgramm, Denise Dittmar, Marco Harms, Kristin Surmann, Uwe Volker, Stephan MichalikUniversity Medicine Greifswald: Greifswald, DE, ,

Read publication here

thermo-fisher-ultimate-3000 thermo-orbitrap-exploris-480 timstof-pro-2
Selective targeting of IL2Rbg combined with radiotherapy triggers CD8- and NK-mediated immunity, abrogating metastasis in HNSCC2023Jacob Gadwa, Maria Amann, Thomas E. Bickett, Christian Klein, Angelo D’Alessandro, Sana D. KaramDepartment of Radiation Oncology, University of Colorado, Anschutz Medical Campus, Aurora, USA,

Read publication here

15-spd 30-spdtimstof-pro
Very early life microbiome and metabolome correlates with primary vaccination variability in children2023Thomas P. Wyche, John Kang, Hendrik Wesseling, Begüm D. Topçuoğlu, Thomas Cairns, Theodore R. Sana, Robin M. Kaufhold, Julia M. Maritz, Christopher H. Woelk, Gokul Swaminathan, James E. Norton Jr., Michael E. PichicheroExploratory Science Center, Merck & Co., Inc., Cambridge, Massachusetts, USA

Read publication here

whisper-40spdthermo-q-exactive-hf-x
Emergence of the Dickeya genus involved duplication of the OmpF porin and the adaptation of the EnvZ-OmpR signaling network2023Clémence Cochard, Marine Caby, Peggy Gruau, Edwige Madec, Michael Marceau, Iulia Macavei, Jérôme Lemoine, Chrystelle Le Danvic, Franck Bouchart, Brigitte Delrue, Sébastien Bontemps-Gallo, Jean-Marie LacroixUniv. Lille, CNRS, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, France

Read publication here

60-spdsciex-zenotof-7600
Red Blood Cells from Individuals with Lesch–Nyhan Syndrome: Multi-Omics Insights into a Novel S162N Mutation Causing Hypoxanthine-Guanine Phosphoribosyltransferase Deficiency2023Julie A. Reisz, Monika Dzieciatkowska, Daniel Stephenson, Fabia Gamboni, D. Holmes Morton, Angelo D’AlessandroDepartment of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, USA

Read publication here

timstof-pro
Deep and fast label-free Dynamic Organellar Mapping2023Julia P. Schessner, Vincent Albrecht, Alexandra K. Davies, Pavel Sinitcyn, Georg H. H. BornerDepartment of Proteomics and Signal Transduction, Systems Biology of Membrane Trafficking Research Group, Max-Planck Institute of Biochemistry, Martinsried, Germany,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Proteomic Analysis of Dysfunctional Liver Sinusoidal Endothelial Cells Reveals Substantial Differences in Most Common Experimental Models of Chronic Liver Diseases2023Mar Gil, Mikel Azkargorta, Carla Fuster, María Martínez-Gómez, Imma Raurell, Aurora Barberá, Juan Manuel Pericàs, Diana Hide, Felix Elortza, Joan Genescà, María MartellLiver Diseases, Vall d’Hebron Institut de Recerca (VHIR), Liver Unit, Hospital Universitari Vall d’Hebron (HUVH), Vall d’Hebron Barcelona Hospital Campus, Universitat Autònoma de Barcelona (UAB)

Read publication here

30-spdtimstof-pro
An unconventional TOG domain is required for CLASP localization2023Nelly Gareil, Alison Gervais, Nicolas Macaisne, Guillaume Chevreux, Julie C. Canman, Jessica Andreani, Julien DumontUniversité Paris Cité, CNRS, Institut Jacques Monod

Read publication here

30-spdtimstof-pro-2
Trans-Omics analysis of post injury thrombo-inflammation identifies endotypes and trajectories in trauma patients2023Christopher B. Erickson, Ian S. Lacroix, Margot Debot, Monika Dzieciatkowska, Terry R. Schaid, Morgan W. Hallas, Otto N. Thielen, Alexis L. Cralley, Anirban Banerjee, Ernest E Moore, Christopher C. Silliman, Angelo D’Alessandro, Kirk C. HansenDepartment of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus; Aurora, CO

Read publication here

timstof-pro
Cell-type-specific regulation of APOE and CLU levels in human neurons by the Alzheimer’s disease risk gene SORL12023Hyo Lee, Aimee J. Aylward, Richard V. Pearse II, Vilas Menon, Jessica E. Young, Tracy L. Young-PearseAnn Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA, USA

Read publication here

60-spdthermo-orbitrap-eclipse-tribid
Robust dimethyl-based multiplex-DIA doubles single-cell proteome depth via a reference channel2023Lisa Schweizer, Thierry M Nordmann, Patricia Skowronek, Maria Wahle, Wen-Feng Zeng, Xie-Xuan Zhou, Andreas-David Brunner, Sabrina Richter, Mitchell P Levesque, Fabian J Theis, Martin Steger, Matthias MannDepartment of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany

Read publication here

whisper-40spdtimstof-pro
Quantitative multiorgan proteomics of fatal COVID-19 uncovers tissue-specific effects beyond inflammation2023Lisa Schweizer, Tina Schaller, Maximilian Zwiebel, Özge Karayel, Johannes Bruno Müller-Reif,Wen-Feng Zeng, Sebastian Dintner, Thierry M Nordmann, Klaus Hirschbühl, Bruno Märkl, Rainer Claus, Matthias MannDepartment of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany

Read publication here

15-spdthermo-orbitrap-exploris-480
Loss of N-terminal acetyltransferase A activity induces thermally unstable ribosomal proteins and increases their turnover in Saccharomyces cerevisiae2023Ulises H. Guzman, Henriette Aksnes, Rasmus Ree, Nicolai Krogh, Magnus E. Jakobsson, Lars J. Jensen, Thomas Arnesen, Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Enhanced CellWall and Cell Membrane Activity Promotes Heat2023Li Wang, Aike Li, Jun Fang, Yongwei Wang, Lixian Chen, Lin Qiao, Weiwei WangAcademy of National Food and Strategic Reserves Administration, College of Bioscience and Biotechnology, Hunan Agricultural University, China

Read publication here

thermo-orbitrap-exploris-480
Mechanisms of nuclear pore complex disassembly by the mitotic Polo-like kinase 1 (PLK-1) in C. elegans embryos2023Sylvia Nkombo Nkoula, Griselda Velez-Aguilera, Batool Ossareh-Nazari, Lucie Van Hove, Cristina Ayuso, Guillaume Chevreux, Laura Thomas, Géraldine Seydoux, Peter Askjaer, Lionel PintardUniversité Paris Cité, CNRS, Institut Jacques Monod

Read publication here

30-spdtimstof-pro-2
Effects of multiple stressors on pancreatic human islets proteome reveal new insights into the pathways involved2023Mehari Muuz Weldemariam, Putty-Reddy Sudhir, Jongmin Woo, Qibin ZhangCenter for Translational Biomedical Research, University of North Carolina at Greensboro, North Carolina Research Campus, Kannapolis, North Carolina, USA

Read publication here

15-spdthermo-orbitrap-exploris-240
N-glycosylation acts as a switch for FGFR1 trafficking between the plasma membrane and nuclear envelope2023Paulina Gregorczyk, Natalia Porebska, Dominika Żukowska, Aleksandra Chorążewska, Aleksandra Gędaj, Agata Malinowska, Jacek Otlewski, Małgorzata Zakrzewska, Łukasz OpalińskiFaculty of Biotechnology, Department of Protein Engineering, University of Wroclaw

Read journal article here

15-spdthermo-orbitrap-exploris-480
Fatty acids abrogate the growth-suppressive effects induced by inhibition of cholesterol2023Yuchuan Li, Manoj Amrutkar, Anette Vefferstad Finstadsveen, Knut Tomas Dalen, Caroline S Verbeke, Ivan P. GladhaugUniversity of Oslo, Oslo University Hospital Rikshospitalet

Read publication here

30-spdbruker-timstof
Cofilin-Driven Nuclear Deformation Drives Dendritic Cell Migration through the Extracellular Matrix2023Shweta Mahajan, Deepti Dabral, Britt Coenen, Frans Bianchi, Niek van Hilten, Herre Jelger Risselada, Wouter H. Roos, Jesper Olsen, Laia Querol Cano, Geert van den BogaartDepartment of Molecular Immunology, Groningen Biomolecular Sciences and Biotechnology,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Clinical proteomics reveals vulnerabilities in non-invasive breast ductal carcinoma and drives personalized treatment strategies2023Georgia Mitsa, Livia Florianova, Josiane Lafleur, Adriana Aguilar-Mahecha, Rene P. Zahedi, Sonia V del Rincon, Mark Basik, Christoph H Borchers, Gerald BatistSegal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC

Read publication here

extended-methodthermo-q-exactive-plus-hybrid-quadrupole-orbitrap
A seven-transmembrane methyltransferase catalysing N-terminal histidine methylation of lytic polysaccharide monooxygenases2023Tanveer S. Batth, Jonas L. Simonsen, Cristina Hernández-Rollán, Søren Brander, Jens Preben Morth, Katja S. Johansen, Morten H. H. Nørholm, Jakob B. Hoof & Jesper V. OlsenThe Novo Nordisk Foundation Center for Protein Research, University of Copenhagen,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Protocol for high-throughput semi-automated label-free- or TMT-based phosphoproteome profiling2023Claire Koenig, Ana Martinez-Val, Previn Naicker, Stoyan Stoychev, Justin Jordaan, Jesper V. OlsenEvosep Biosystems, Odense, Denmark, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark, ReSyn Biosciences, Pretoria, South Africa, , ,

Read publication here

30-spd 60-spd whisper-20spd whisper-40spdthermo-orbitrap-exploris-480
One-Tip enables comprehensive proteome coverage in minimal cells and single zygotes2023Zilu Ye, Pierre Sabtier, Javier Martin-Gonzalez, Akihiro Eguchi, Dorte Bekker-Jensen, Nicolai Bache, Jesper V. OlsenDenmark, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark, Core Facility for Transgenic Mice, Department of Experimental Medicine, University of Copenhagen, Denmark,

Read publication here

whisper-40spdthermo-orbitrap-astral thermo-orbitrap-exploris-480
A complete and automated end-to-end sample preparation strategy for high-throughput and standardized proteomics with high sensitivity2023Magnus Huusfeldt, Joel Vej-Nielsen, Dorte B. Bekker-Jensen, Lasse Falkenby, Jesper V. Olsen, Nicolai BacheEvosep Biosystems, Denmark, University of Copenhagen, ,

Read app note here

100-spd 30-spd whisper-40spd
Pushing the boundaries for robust and high-throughput single cell analysis with Whisper Flow technology powered by dia-PASEF2023Dorte B. Bekker-Jensen, Christoph Krisp, David Hartlmayr, Anjali Seth, Ole B. Hørning, Magnus Huusfeldt, Andreia Almeida, Markus Lubeck, Gary Kruppa, Jarrod Sandow & Nicolai BacheEvosep Biosystems, Bruker Daltonics GmBH & Co. KG, Cellenion, IonOpticks, Bruker s.r.o,

Read app note here

whisper-40spd whisper-80-spdbruker-timstof-scp
Rapid and robust PTM peptide mapping for biologics with the Evosep One and the ZenoTOF 76002023Moritz Heusel, Stephen Lock, Nick Morrice, Sibylle Heidelberger, Jakob Bunkenborg, Michael Barrett Andersen, Nicolai BacheEvosep Biosystems, SCIEX Macclesfield, , ,

Read app note here

100-spd 200-spd 300-spd 60-spdsciex-zenotof-7600
A genetic code change in progress: tRNA-Leu(CAG) is conserved in most Saccharomycopsis yeast 3 species but is non-essential and does not compete with tRNA-Ser(CAG) in translation2023Eoin Ó Cinnéide, Caitriona Scaife, Eugene Dillon, Kenneth H. WolfeUniversity College Dublin

Read publication here

15-spdbruker-timstof-pro
Distribution and Chemistry of Phoenixin-14, a Newly Discovered Sensory Transmission Molecule in Porcine Afferent Neurons2023Urszula Mazur, Ewa Lepiarczyk, Paweł Janikiewicz, Elżbieta Łopieńska-Biernat, Mariusz Krzysztof Majewski and Agnieszka BossowskaUniversity of Warmia and Mazury in Olsztyn

Read journal article here

15-spdthermo-orbitrap-exploris-480
Altered intratumoral immune composition after Nivolumab treatment in patients with recurrent glioblastoma2023Sine Hadrup, Signe Skadborg, Simone Maarup, Arianna Draghi, Annie Borch, Sille Hendriksen, Filip Mundt, Matthias Mann, Jane Skjoeth-Rasmussen, Christina Westmose Yde, Hans Poulsen, Benedikte Hasselbach, Inge Marie SvaneTechnical University of Denmark, Rigshospitalet, Copenhagen University Hospital, University of Copenhagen, Rigshospitalet

Read journal article here

30-spdbruker-timstof-pro
Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function2023Kai Liu, Ralf Nilsson, Elisa Lázaro-Ibáñez, Hanna Duàn, Tasso Miliotis, Marie Strimfors, Michael Lerche, Ana Rita Salgado Ribeiro, Johan Ulander, Daniel Lindén, Anna Salvati & Alan SabirshAstraZeneca, University of Gothenburg

Read journal article here

30-spdthermo-q-exactive-hf
Using In Vivo Intact Structure for System-wide Quantitative Analysis of Changes in Proteins2023John Yates III, Ahrum Son, Hyunsoo Kim, Jolene Diedrich, Tom Bamberger, Daniel McClatchyScripps Research Institute, Chungnam National University

Read publication here

30-spdbruker-timstof-pro
AZGP1 as a potential biomarker of IgA vasculitis with nephritis in a children‑based urinary proteomics study by diaPASEF2023Zhi‑Qing Zhu, Tian Zhang, Shuo Chang, Zhen‑Hua Ren and Qin ZhangFirst Affiliated Hospital of Anhui Medical University, Anhui Medical University

Read publication here

bruker-timstof
Cross-Linking Mass Spectrometry on P-Glycoprotein2023Gabriella Gellen, Eva Klement, Kipchumba Biwott, Gitta Schlosser,Gergő Kalló, Éva Csősz, Katalin F. Medzihradszky and Zsolt BacsoELTE Eötvös Loránd University, University of Debrecen, HCEMM, BRC

Read journal article here

extended-methodthermo-orbitrap-fusion-lumos
Profiling of the Klebsiella pneumoniae Phosphoproteome under Iron-Limited and Iron-Replete Conditions2023Chelsea Reitzel, Arjun Sukumaran, Benjamin Muselius, Siobhan O’Connor, Jennifer Geddes-McAlisterUniversity of Guelph

Read journal article here

thermo-orbitrap-exploris-240
Topological defects at smectic interfaces as a potential tool for the biosensing of living microorganisms2023Vajra S. Badha, Tagbo H.R. Niepa, and Mohamed Amine GharbiaUniversity of Massachusetts Boston, Carnegie Mellon University,

Read publication here

bruker-timstof-ht
TIMSTOF Compass 4.0 Methods – LCMS and MALDI – OrsburnLab 2023 v12023Benjamin OrsburnThe Johns Hopkins University School of Medicine

Read publication here

whisper-40spdbruker-timstof
ATP synthase interactome analysis identifies a new subunit l as a modulator of permeability transition pore in yeast2023Chiranjit Panja, Aneta Wiesyk, Katarzyna Niedźwiecka, Emilia Baranowska & Roza KucharczykPolish Academy of Sciences

Read publication here

thermo-orbitrap-exploris-480
DIS3 ribonuclease prevents the cytoplasmic accumulation of lncRNAs carrying non-canonical ORFs, which represent a source of cancer immunopeptides2023Dominika Foretek, Marc Gabriel, Isabelle Hatin, Julien Jarroux, Marina Pinskaya, Elise Pepermans, Kurt Boonen, Rachel Topno, Vera Slaninova, Marina Serna, Oscar Llorca, Geert Baggerman, Edouard Bertrand, Steven West, Olivier NamyInstitut Curie, Institute for Integrative Biology of the Cell, Weill Cornell Medicine, Institut Curie-CNRS, University of Antwerp, Institut Genetique Humaine, Spanish National Cancer Research Center (CNIO), Institut de Génétique Humaine, University of

Read journal article here

30-spdbruker-timstof-pro
The protein and miRNA profile of plasma extracellular vesicles (EVs) can distinguish feline mammary adenocarcinoma patients from healthy feline controls2023Jane Howard, John Browne, Stephanie Bollard, Susan Peters, Ciara Sweeney, Kieran Wynne, Shirley Potter, Amanda McCann & Pamela KellyUniversity College Dublin, Mater Misericordiae University Hospital

Read journal article here

30-spdbruker-timstof-pro
Fast proteomics with dia-PASEF and analytical flow-rate chromatography2023Lukasz Szyrwiel, Christoph Gille, Michael Mülleder, Vadim Demichev, Markus RalserUniversitätsmedizin Berlin, University of Oxford, Max Planck Institute for Molecular Genetics

Read publication here

400-spdbruker-timstof-pro
Co-administration of angiotensin II and simvastatin triggers kidney injury upon heme oxygenase-1 deficiency2023Aleksandra Kopacz, Damian Kloska, Dominik Cysewski, Izabela Kraszewska, Karolina Przepiorska, Małgorzata Lenartowicz, Agnieszka Łoboda, Anna Grochot-Przęczek, Witold Nowak, Alicja Jozkowicz, and Aleksandra Piechota-PolanczykJagiellonian University, Polish Academy of Sciences, and Białystok,

Read publication here

30-spdthermo-orbitrap-exploris-480
Vacuum Insulated Probe Heated Electrospray Ionization Source Enhances Microflow Rate Chromatography Signals in the Bruker timsTOF Mass Spectrometer2023Mukul K. Midha, Charu Kapil, Michal Maes, David H. Baxter, Seamus R. Morrone, Timothy J. Prokop, and Robert L. MoritzInstitute for Systems Biology, , , ,

Read publication here

100-spd 15-spd 200-spd 30-spd 60-spdbruker-timstof
Structural insights into Siglec-15 reveal glycosylation dependency for its interaction with T cells through integrin CD11b2023Maria Pia Lenza, Leire Egia-Mendikute, Asier Antoñana-Vildosola, Cátia O. Soares, Helena Coelho, Francisco Corzana, Alexandre Bosch, Prodhi Manisha, Jon Imanol Quintana, Iker Oyenarte, Luca Unione, María Jesús Moure, Mikel Azkargorta, Unai Atxabal, KlaudiCenter for Cooperative Research in Biosciences, NOVA School of Science and Technology, University of La Rioja,

Read journal article here

30-spdbruker-timstof-pro
Evaluation of a ‘plug and play’ nanoflow liquid chromatography system for MS-based proteomic characterization of clinical FFPE specimens2023Georgia Mitsa, Vincent R Richard, Yasamin Majedi, Josiane Lafleur, Adriana Aguilar-Mahecha, Mark Basik, Christoph H BorchersMcGill University, Jewish General Hospital

Read journal article here

15-spdthermo-q-exactive
More proteome coverage in a single experiment with the Extended method2023Evosep Biosystems

Download app note

extended-method
A specialized separation method for hydrophobic targets with the High Organic method2023Evosep Biosystems

Download app note

high-organic-method
A specialized method using Whisper Flow technology with a throughput of 20 samples per day2023Evosep Biosystems

Download app note

whisper-20spd
A specialized method using Whisper Flow technology with a throughput of 80 samples per day2023Evosep Biosystems

Download app note

whisper-80-spd
A standardized separation method with a throughput of 500 samples per day2023Evosep Biosystems

Download app note

500-spd
A specialized method using Whisper Flow technology with a throughput of 40 samples per day2023Evosep Biosystems

download app note

whisper-40spd
Evotip Pure simplifies workflows with excellent reproducibility, storage and recovery2023Evosep Biosystems, ,

Download app note

100-spd 60-spd whisper-40spd
Towards a Standardized Omics Platform with the 60 samples per day method2023EvosepEvosep

Download application note

60-spdthermo-orbitrap-exploris-480
Towards a Standardized Omics Platform with the 100 samples per day method2023EvosepEvosep

Download brochure

100-spdthermo-orbitrap-exploris-480
Towards a Standardized Omics Platform with the 200 samples per day method2023EvosepEvosep

Download application note

200-spdthermo-orbitrap-exploris-480
A standardized separation method with a throughput of 300 samples per day2023EvosepEvosep

Download application note

300-spdthermo-orbitrap-exploris-480
Evosep One solves the proteomics dilemma – covering high throughput analysis and proteome depth2023Evosep Biosystems, , , ,

Download application note

100-spd 200-spd 30-spd 300-spd 60-spd
End-to-end, fully automated digestion protocol and Evotip Pure workflow on the Opentrons OT-22023Evosep BiosystemsEvosep Biosystems,

Download application note here

100-spd whisper-40spdtimstof-pro-2
Fully automated, rapid, robust sample loading on Evotip Pure with the Agilent AssayMAP Bravo2023Evosep BiosystemsEvosep Biosystems, ,

Download application note here

100-spd whisper-40spdsciex-zenotof-7600 timstof-pro-2
Epigenetic inactivation of the 5-methylcytosine RNA methyltransferase NSUN7 is associated with clinical outcome and therapeutic vulnerability in liver cancer2023Vanessa Ortiz-Barahona, Marta Soler, Veronica Davalos, Carlos A. García-Prieto, Maxime Janin, Fernando Setien, Irene Fernández-Rebollo, Joan J. Bech-Serra, Carolina De La Torre, Sonia Guil, Alberto Villanueva, Pei-Hong Zhang, Li Yang, Marco Guarnacci, UlrJosep Carreras Leukaemia Research Institute. Barcelona Supercomputing Center (BSC), Germans Trias i Pujol Health Science Research Institute, Bellvitge Biomedical Research Institute, University of Chinese Academy of Sciences, l, Fudan University and Shangh

Read publication here

15-spdthermo-orbitrap-eclipse-tribid
Comprehensive proteomic characterization and functional annotation of Siberian sturgeon seminal plasma proteins2023Natalia Kodzik, Andrzej Ciereszko, Mirosław Szczepkowski, Halina Karol, Sylwia Judycka, Agata Malinowska, Bianka Swiderska and Mariola A. DietrichPolish Academy of Sciences and Inland Fisheries Institute in Olsztyn

Read publication here

15-spdthermo-orbitrap-exploris-480
Brain molecular mechanisms in Rasmussen encephalitis2023Dominique F. Leitner, Ziyan Lin, Zacharia Sawaged, Evgeny Kanshin, Daniel Friedman, Sasha Devore, Beatrix Ueberheide, Julia W. Chang, Gary W. Mathern, Jasper J. Anink, Eleonora Aronica, Thomas Wisniewski and Orrin DevinskyNYU Grossman School of Medicine, University of California, University of Amsterdam and Epilepsy Institutes of the Netherlands Foundation

Read publication here

15-spdthermo-q-exactive-hf-x
Resolving the Temporal Splenic Proteome during Fungal Infection for Discovery of Putative Dual Perspective Biomarker Signatures2023Benjamin Muselius, Florence Roux-Dalvai, Arnaud Droit and Jennifer Geddes-McAlisterUniversity of Guelph, CHU de Québec - Université Laval Research Center and University of Guelph

Read publication here

60-spdthermo-orbitrap-exploris-480
In situ digestion of alcohol-fixed cells for quantitative proteomics2022Atsushi Hatano, Tomoyo Takami and Masaki MatsumotoGraduate School of Medical and Dental Sciences and Niigata University

Read publication here

60-spdthermo-orbitrap-exploris-480
Astaxanthin supplementation counters exercise-induced decreases in immune-related plasma proteins2023David C. Nieman, Jongmin Woo, Camila A. Sakaguchi, Ashraf M. Omar, Yang Tang, Kierstin Davis, Alessandra Pecorelli, Giuseppe Valacchi and Qibin ZhangAppalachian State University, University of North Carolina at Greensboro, North Carolina State University and University of Ferrara

Read publication here

60-spdthermo-orbitrap-exploris-480
Proteomic Analysis of Mesenchymal Stem Cells and Monocyte Co-Cultures Exposed to a Bioactive Silica-Based Sol–Gel Coating2023Andreia Cerqueira, Francisco Romero-Gavilán, Heike Helmholz, Mikel Azkargorta, Félix Elortza, Mariló Gurruchaga, Isabel Goñi, Regine Willumeit-Römer and Julio SuayUniversitat Jaume, Helmholtz-Zentrum Hereon Institute of Metallic Biomaterials, CIC bioGUNE and University of the Basque Country

Read publication here

30-spdbruker-timstof-pro
In depth profiling of the cancer proteome from the flowthrough of standard RNA-preparation kits for precision oncology2023Filip Mundt, Annelaura Bach Nielsen, Josephine Kerzel Duel, Christina Westmose Yde, Martina Amnitzbøll Eriksen, Ulrik Lassen, Finn Cilius Nielsen, Kristoffer Rohrberg and Matthias MannUniversity of Copenhagen, Novo Nordisk, Copenhagen University Hospital, Rigshospitalet and Max Planck Institute of Biochemistry

Read publication here

30-spdbruker-timstof-scp
Simultaneous targeting of PD-1 and IL-2Rbg with radiation therapy inhibits pancreatic cancer growth and metastasis2023Miles Piper, Maureen Hoen, Laurel B. Darragh, Michael W. Knitz, Diemmy Nguyen, Jacob Gadwa, Greta Durini, Idil Karakoc, Abby Grier, Brooke Neupert, Benjamin Van Court, Khalid N.M. Abdelazeem, Justin Yu, Nicholas A. Olimpo, Sophia Corbo, Richard Blake RossUniversity of Colorado and Roche Innovation Center Zurich

Read publication here

whisper-20spdbruker-timstof-scp
Reduced binding of apoE4 to complement factor H promotes amyloid-β oligomerization and neuroinflammation2023Larisa Chernyaeva, Giorgio Ratti, Laura Teirilä, Satoshi Fudo, Uni Rankka, Anssi Pelkonen, Paula Korhonen, Katarzyna Leskinen, Salla Keskitalo, Kari Salokas, Christina Gkolfinopoulou, Katrina E Crompton, Matti Javanainen, Lotta Happonen, Markku Varjosalo,University of Helsinki, University of Eastern Finland, National Center for Scientific Research "Demokritos", Newcastle University, Lund University and Kuopio University Hospital

Read publication here

60-spdbruker-timstof-pro
Mass spectrometry-based proteomics approaches to interrogate skeletal muscle adaptations to exercise2023Daniel T. Cervone, Roger Moreno-Justicia, Júlia Prats Quesada and Atul S. DeshmukhUniversity of Copenhagen, ,

Read publication here

bruker sciex thermo
Matrix Gla Protein drives stemness and tumor initiation in ovarian cancer2023V. Nieddu, V. Melocchi, C. Battistini, G. Franciosa, M. Lupia, C. Stellato, G. Bertalot, J. V. Olsen, N. Colombo, F. Bianchi and U. CavallaroEuropean Institute of Oncology IRCSS, Fondazione IRCCS Casa Sollievo della Sofferenza, University of Copenhagen, APSS, University of Trento and University of Milan-Bicocca Centre for Medical Sciences – CISMed, taly University of Milan-Bicocca, ondazione I

Read publication here

30-spdthermo-q-exactive-480
A desert Chlorella sp. that thrives at extreme high-light intensities using a unique photoinhibition protection mechanism2023Guy Levin, Michael Yasmin, Varda Liveanu, Carmit Burstein, Rawad Hanna, Oded Kleifeld, Marc C. Simanowitz, Ayala Meir, Yaakov Tadmor, Joseph Hirschberg, Noam Adir and Gadi SchusterTechnion, Hebrew University of Jerusalem & Newe Ya'ar Research Center

Read publication here

30-spdthermo-q-exactive-hf
Characteristics of size-exclusion chromatography enriched porcine follicular fluid extracellular vesicles2023Kinga Kaminska, Kasun Godakumara, Bianka Swiderska, Agata Malinowska, Getnet Midekessa, Kamila Sofinska, Jakub Barbasz, Alireza Fazeli and Malgorzata GrzesiakJagiellonian University, Estonian University of Life Sciences, University of Tartu, Polish Academy of Sciences, University of Sheffield

Read publication here

extended-methodthermo-orbitrap-exploris-480
A Longitudinal Study of Individual Radiation Responses in Pediatric Patients Treated with Proton and Photon Radiotherapy, and Interventional Cardiology: Rationale and Research Protocol of the HARMONIC Project2023Maria Grazia Andreassi, Nadia Haddy, Mats Harms-Ringdahl, Jonica Campolo, Andrea Borghini, François Chevalier, Jochen M. Schwenk, Brice Fresneau, Stephanie Bolle, Manuel Fuentes and Siamak HaghdoostCNR National Research Council Institute of Clinical Physiology, Université Paris-Saclay, Stockholm University, CEA-CNRS-ENSICAEN-University of Caen Normandy, Advanced Resource Center for HADrontherapy in Europe, SciLifeLab and University of Salamanca-CSIC

Read publication here

60-spdtimstof-pro-2
Flexibility, speed, and throughput for high proteome coverage using Zeno SWATH data-independent acquisition (DIA) coupled with the Evosep One system2023Patrick Pribil and Ihor BatruchSciex, , , , , ,

Read publication here

100-spd 200-spd 30-spd 300-spd 500-spd 60-spdsciex-zenotof-7600 timstof-pro-2
The GAPDH redox switch safeguards reductive capacity and enables survival of stressed tumour cells2023Deepti Talwar, Colin G. Miller, Justus Grossmann, Lukasz Szyrwiel, Torsten Schwecke, Vadim Demichev, Ana-Matea Mikecin Drazic, Anand Mayakonda, Pavlo Lutsik, Carmen Veith, Michael D. Milsom, Karin Müller-Decker, Michael Mülleder, Markus Ralser  & Tobias PNature Metabolism

Read publication here

15-spdtimstof-pro-2
Suspension TRAPping Filter (sTRAP) Sample Preparation for Quantitative Proteomics in the Low µg Input Range Using a Plasmid DNA Micro-Spin Column: Analysis of the Hippocampus from the 5xFAD Alzheimer’s Disease Mouse Model2023Evangelia Thanou, Frank Koopmans, Débora Pita-Illobre, Remco V. Klaassen,Berna Özer, Ioannis Charalampopoulos, August B. Smit, and Ka Wan LiAmsterdam Neuroscience, University of Crete, Foundation for Research and Technology Hellas

Read publication here

30-spdtimstof-pro-2
Simultaneous targeting of PD-1 and IL-2Rβγ with radiation therapy inhibits pancreatic cancer growth and metastasis2023Miles Piper, Maureen Hoen, Laurel B. Darragh, Michael W. Knitz, Diemmy Nguyen, Jacob Gadwa, Greta Durini, Idil Karakoc, Abby Grier, Brooke Neupert, Benjamin Van Court, Khalid N.M. Abdelazeem, Justin Yu, Nicholas A. Olimpo, Sophia Corbo, Richard Blake RossUniversity of Colorado, University of Colorado

Read publication here

whisper-20spdbruker-timstof-scp
Myosin inhibitor reverses hypertrophic cardiomyopathy in pediatric iPSC-cardiomyocytes to mirror variant correction2023Caroline Kinnear, Abdelrahman Said, Guoliang Meng, Yimu Zhao, Erika Y Wang, Neha Parmar, Wei Wei, Filio Billia, MD, Craig A Simmons, Milica Radisic, James Ellis, Seema MitalThe Hospital for Sick Children, University of Toronto, University Health Network, Massachusetts Institute of Technology, Ted Rogers Centre for Heart Research

Read publication here

60-spdthermo-orbitrap-fusion-lumos
Dynamic antagonism between key repressive pathways maintains the placental epigenome2023Raha Weigert, Sara Hetzel, Nina Bailly, Chuck Haggerty, Ibrahim A. Ilik, Philip Yuk Kwong Yung, Carmen Navarro, Adriano Bolondi, Abhishek Sampath Kumar, Chiara Anania, Björn Brändl, David Meierhofer, Darío G. Lupiáñez, Franz-Josef Müller, Tugce Aktas, SimTechnische Universität Berlin, , Max Planck Institute for Molecular Genetics, Freie Universität Berlin, Karolinska Institutet, Max-Delbrück Center for Molecular Medicine, Universitätsklinikum Schleswig-Holstein Campus Kiel, Yale School of Medicine, Broad

Read journal article here

30-spdbruker-timstof-scp
Blue Native PAGE–Antibody Shift in Conjunction with Mass Spectrometry to Reveal Protein Subcomplexes: Detection of a Cerebellar α1/α6-Subunits Containing γ-Aminobutyric Acid Type A Receptor Subtype2023Miao Chen,Frank Koopmans, Iryna Paliukhovich,Sophie J. F. van der Spek, Jian Dong, August B. Smit, Ka Wan LiVrije Universiteit Amsterdam, Boston University

Read journal article here

30-spdtimstof-pro-2
Foresight in clinical proteomics: current status, ethical considerations, and future perspectives2023Filip Mundt, Nicolai J. Wewer Albrechtsen, Sebastian Porsdam Mann, Peter Treit, Medini Ghodgaonkar-Steger, Martina O’Flaherty, Reinout Raijmakers, Juan Antonio Vizcaíno, Albert J.R. Heck, Matthias MannUniversity of Copenhagen, University of Oxford, Max Planck Institute of Biochemistry, Utrecht University, European Bioinformatics Institute (EMBL-EBI)

Read journal article here

thermo-orbitrap-exploris-480
Experimental strategies to improve drug-target identification in mass spectrometry-based thermal stability assays2023Clifford G. Phaneuf, Konstantin Aizikov, Dmitry Grinfeld, Arne Kreutzmann, Daniel Mourad, Oliver Lange, Daniel Dai, Bailin Zhang, Alexei Belenky, Alexander A. Makarov & Alexander R. IvanovNortheastern University, Thermo Fisher Scientific, Disease Profiling and Functional Genomics, Tarmeta Biosciences

Read journal article here

30-spdthermo-orbitrap-exploris-480
Rapid Profiling of Protein Complex Reorganization in Perturbed Systems2023Isabell Bludau, Charlotte Nicod, Claudia Martelli, Peng Xue, Moritz Heusel, Andrea Fossati, Federico Uliana, Fabian Frommelt, Ruedi Aebersold, and Ben C. CollinsETH Zürich, Max Planck Institute of Biochemistry, Lund University, University of California San Francisco, Queen’s University of Belfast

Read journal article here

60-spdsciex-tripletof-6600-ms-system
Towards a Standardized Omics Platform with the 30 samples per day method2023EvosepEvosep

Download application note

30-spdthermo-orbitrap-exploris-480
A simple, time- and cost-effective, high-throughput depletion strategy for deep plasma proteomics2023Arthur Viode, Patrick van Zalm, Kinga K. Smolen, Benoit Fatou, David Stevenson, Meenakshi Jha, Ofer Levy, Judith Steen and Hanno SteenBoston Children's Hospital, Harvard Medical School, Maastricht University and Broad Institute of MIT and Harvard

Read publication here

60-spdtimstof-pro-2
A Streamlined High-Throughput Plasma Proteomics Platform for Clinical Proteomics with Improved Proteome Coverage, Reproducibility, and Robustness2023Jongmin Woo and Qibin ZhangUniversity of North Carolina

Read publication here

60-spdthermo-orbitrap-exploris-240
Cell-type-specific regulation of APOE levels in human neurons by the Alzheimer’s disease risk gene SORL12023Hyo Lee, Aimee J. Aylward, Richard V. Pearse II, Yi-Chen Hsieh, Zachary M. Augur, Courtney R. Benoit, Vicky Chou, Allison Knupp, Cheryl Pan, Srilakshmi Goberdhan, Duc M. Duong, Nicholas T. Seyfried, David A. Bennett, Hans-Ulrich Klein, Philip L. De Jager,Brigham and Women’s Hospital and Harvard Medical School, University of Washington, Emory School of Medicine, Rush University Medical Center & Columbia University Irving Medical Center

Read publication here

60-spdthermo-orbitrap-eclipse-tribid
INPP5D/SHIP1 regulates inflammasome activation in human microglia2023Vicky Chou, Seeley B. Fancher, Richard V. Pearse II, Hyo Lee, Matti Lam, Nicholas T. Seyfried, David A. Bennett, Phillip L. De Jager, Vilas Menon & Tracy L. Young-PearseBrigham and Women’s Hospital and Harvard Medical School, Columbia University Medical Center, Emory School of Medicine & Rush University Medical Center

Read publication here

60-spdthermo-orbitrap-eclipse-tribid
DIP-MS: A novel ultra-deep interaction proteomics for the deconvolution of protein complexes2023Fabian Frommelt, Andrea Fossati, Federico Uliana, Fabian Wendt, Xue Peng, Moritz Heusel, Bernd Wollscheid, Ruedi Aebersold, Rodolfo Ciuffa and Matthias GstaigerETH Zurich, University of California San Francisco, J. David Gladstone Institutes, ETHZ Zurich & Evosep Biosystems

Read publication here

60-spdthermo-q-exactive-970-tm-plus-hybrid-quadrupole-orbitrap
Optimizing linear ion trap data independent acquisition towards single cell proteomics2023Teeradon Phlairaharn, Zilu Ye, Elena Krismer, Anna-Kathrine Pedersen, Maik Pietzner, Jesper V. Olsen, Erwin M. Schoof and Brian C. SearleUniversity of Copenhagen, Technical University of Munich, Germany, Berlin Institute of Health at Charité–Universitätsmedizin & The Ohio State University,

Read publication here

whisper-20spd whisper-40spdthermo-orbitrap-eclipse-tribid
Luminescence-based screening for extracellular vesicle release modulators reveals a role for PI4KIIIβ in exosome biogenesis upon lysosome inhibition2023Maarten P. Bebelman, Caitrin Crudden, Bart Snieder, Evangelia Thanou, Catharina J.M. Langedijk, Margarida Viola, Steven Eleonora, Urszula Baginska, Olaf Cotugno, Jan Paul M. Bebelman, Monique A.J. van Eijndhoven, Leontien Bosch, Ka Wan Li, Martine J. SmitVrije Universiteit Amsterdam, University Medical Center Utrecht, Université de Paris & Utrecht Universit

Read publication here

30-spdtimstof-pro-2
Label-free single cell proteomics utilizing ultrafast LC and M Sinstrumentation: A valuable complementary technique to multiplexing2023Manuel Matzinger, Rupert L. Mayer & Kar l. MechtlerVienna BioCenter,

Read publication here

whisper-20spd whisper-40spd
Mechanisms of Nuclear Pore Complex disassembly by the mitotic Polo Like Kinase 1 (PLK-1) in C. elegans embryos2023Sylvia Nkombo Nkoula, Griselda Velez-Aguilera, Batool Ossareh-Nazari, Lucie Van Hove, Cristina Ayuso, Véronique Legros, Guillaume Chevreux, Laura Thomas, Géraldine Seydoux, Peter Askjaer and Lionel PintardUniversité Paris Cité, Programme équipe Labellisée Ligue contre le Cancer, Johns Hopkins University School of Medicine & CSIC/JA/Universidad Pablo de Olavide

Read publication here

30-spdtimstof-pro-2
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC2023Stephan Kamrad, Clara Correia-Melo, Lukasz Szyrwiel, Simran Kaur Aulakh, Jürg Bähler, Vadim Demichev, Michael Mülleder & Markus RalserCharité Universitätsmedizin Berlin, The Francis Crick Institute, University College London, University of Oxford & Max Planck Institute for Molecular Genetics

Read publication here

extended-methodtimstof-pro-2
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H12023Stephen Abini-Agbomson, Kristjan Gretarsson, Rochelle M. Shih, Laura Hsieh, Tracy Lou, Pablo De Ioannes, Nikita Vasilyev, Rachel Lee, Miao Wang, Matthew Simon, Jean-Paul Armache, Evgeny Nudler, Geeta Narlikar, Shixin Liu, Chao Lu & Karim-Jean ArmacheNew York University Grossman School of Medicine, Columbia University Irving Medical Center, The Rockefeller University, University of California, Howard Hughes Medical Institute, Yale University & Pennsylvania State University

Read publication here

extended-methodthermo-orbitrap-fusion
A standardized and reproducible workflow for membrane glass slides in routine histology and spatial proteomics2023Thierry M. Nordmann, Lisa Schweizer, Andreas Metousis, Marvin Thielert, Edwin Rodriguez, Lise Mette Rahbek-Gjerdrum, Pia-Charlotte Stadler, Michael Bzorek, Andreas Mund, Florian A. Rosenberger & Matthias MannMax Planck Institute of Biochemistry, Zealand University Hospital, LMU Munich & University of Copenhagen

Read publication here

whisper-20spdbruker-timstof-scp
First trimester serum apolipoproteins in the prediction of late-onset preeclampsia2023Emma J. Bendix, Julie D. Ravn, Lene Sperling & Martin OvergaardOdense University Hospital & University of Southern Denmark

Read publication here

60-spdthermo-altis-triple-quadrupole
An Electrophysiological and Proteomic Analysis of the Effects of the Superoxide Dismutase Mimetic, MnTMPyP, on Synaptic Signalling Post-Ischemia in Isolated Rat Hippocampal Slices2023Martina Puzio, Niamh Moreton, Mairéad Sullivan, Caitriona Scaife, Jeffrey C. Glennon & John J. O’ConnorUniversity College Dublin

Read publication here

30-spdbruker-timstof-pro
No-stain protein labeling as a potential normalization marker for small extracellular vesicle proteins2023Anjugam Paramanantham, Rahmat Asfiya, Siddharth Das, Grace McCully & Akhil SrivastavaUniversity of Missouri School of Medicine

Read publication here

30-spdtimstof-pro-2
Mesenchyme-derived vertebrate lonesome kinase controls lung organogenesis by altering the matrisome2023Salome M. Brütsch, Elizabeta Madzharova, Sophia Pantasis, Till Wüstemann, Selina Gurri, Heiko Steenbock, Amiq Gazdhar, Gisela Kuhn, Peter Angel, Saverio Bellusci, Jürgen Brinckmann, Ulrich auf dem Keller, Sabine Werner and Mattia R. BordoliETH Zurich, Technical University of Denmark, University of Lübeck, University Hospital Bern, German Cancer Research Center, German Lung Research Center & Universities of Giessen and Marburg Lung Center

Read publication here

30-spdthermo-q-exactive-hf-x
Proteomic characteristics and diagnostic potential of exhaled breath particles in patients with COVID-192023Gabriel Hirdman, Embla Bodén, Sven Kjellström, Carl‑Johan Fraenkel, Franziska Olm, Oskar Hallgren and Sandra LindstedtLund University, Department of Infection Control Region Skåne and Skåne University Hospital

Read publication here

60-spdbruker-timstof-pro
ATP synthase interactome analysis identifies a new subunit l as a modulator of permeability transition pore in yeast2023Chiranjit Panja, Aneta Wiesyk, Katarzyna Niedźwiecka, Emilia Baranowska, Roza KucharczykPolish Academy of Sciences

Read publication here

thermo-orbitrap-exploris-480
Characterization of a highly conserved MUC5B-degrading protease, MdpL, from Limosilactobacillus fermentum2023Fredrik Leo, Gunnel Svensäter, Rolf Lood, Claes WickströmMalmö University, Genovis AB, Lund University

Read publication here

thermo-q-exactive-hf-x
Vacuum Insulated Probe Heated ElectroSpray Ionization source (VIP-HESI) enhances micro flow rate chromatography signals in the Bruker timsTOF mass spectrometer2023Mukul K. Midha, Charu Kapil, Michal Maes, David H. Baxter, Seamus R. Morrone, Timothy J. Prokop & Robert L. MoritzInstitute for Systems Biology, , , ,

Read publication here

100-spd 200-spd 30-spd 60-spd extended-methodbruker-timstof-pro
A standardized and reproducible workflow for membrane glass slides in routine histology and spatial proteomics2023Thierry M. Nordmann, Lisa Schweizer, Andreas Metousis, Marvin Thielert, EdwinRodriguez, Lise Mette Rahbek-Gjerdrum, Pia-Charlotte Stadler, Michael Bzorek, Andreas Mund, Florian A. Rosenberger & Matthias MannMax Planck Institute of Biochemistry, Zealand University Hospital, University Hospital Munich & University of Copenhagen

Read publication here

whisper-20spdbruker-timstof-scp
Proteomic analysis identifies dysregulated proteins and associated molecular pathways in a cohort of gallbladder cancer patients of African ancestry2023Pavan Baichan, Previn Naicker, Tanya Nadine Augustine, Martin Smith, Geofrey Candy, John Devar and Ekene Emmanuel NwekeUniversity of the Witwatersrand, Council for Scientifc and Industrial Research & Chris Hani-Baragwanath Academic Hospital

Read publication here

60-spdsciex-tripletof-6600-ms-system
Label-free single cell proteomics utilizing ultrafast LC and MS instrumentation: A valuable complementary technique to multiplexing2023Manuel Matzinger, Rupert L. Mayer & Karl MechtlerVienna BioCenter,

Read publication here

whisper-20spd whisper-40spd
Extracellular Vesicles Isolated from Plasma of Multiple Myeloma Patients Treated with Daratumumab Express CD38, PD-L1, and the Complement Inhibitory Proteins CD55 and CD592022Kieran Brennan, Katrine F. Iversen, Alfonso Blanco-Fernández, Thomas Lund, Torben Plesner and Margaret M. Mc GeeUniversity College Dublin, University of Southern Denmark & Odense University Hospital

Read publication here

30-spdbruker-timstof-pro
RGS14 is neuroprotective against seizure-induced mitochondrial oxidative stress and pathology in hippocampus2023Nicholas H Harbin, Daniel J Lustberg, Cheyenne Hurst, Jean-Francois Pare, Kathryn M Crotty, Alaina L Waters, Samantha M Yeligar, Yoland Smith, Nicholas T Seyfried, David Weinshenker and John R HeplerEmory University School of Medicine

Read publication here

extended-methodthermo-q-exactive-plus-hybrid-quadrupole-orbitrap
SENP2 knockdown in human adipocytes reduces glucose metabolism and lipid accumulation, while increases lipid oxidation2023Solveig A. Krapf, Jenny Lund, Hege G. Bakke, Tuula A. Nyman, Stefano Bartesaghi, Xiao-Rong Peng, Arild C. Rustan, G. Hege Thoresen and Eili T. KaseUniversity of Oslo, Oslo University Hospital & AstraZeneca

Read publication here

extended-methodsciex-tripletof-6600-ms-system
Systematic Adaptation of Bacillus licheniformis to 2-Phenylethanol Stress2023Yangyang Zhan,Haixia Xu, Hween Tong Tan, Ying Swan Ho, Dongxiao Yang, Shuwen Chen, Dave Siak-Wei Ow, Xin Lv, Fang Wei, Xuezhi Bi and Shouwen ChenHubei University, Bioprocessing Technology Institute (BTI) & Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences

Read publication here

30-spdsciex-tripletof-6600-ms-system
A chemoproteomic platform for reactive fragment profiling against the deubiquitinases2023Rosa Cookson, Aini Vuorinen, Jonathan Pettinger, Cassandra R. Kennedy, Joanna M. Kirkpatrick, Rachel E. Peltier-Heap, Andrew Powell, Ambrosius P. Snijders, Mark Skehel, David House, Katrin Rittinger and Jacob T. BushGSK & The Francis Crick Institute,

Read publication here

30-spd 60-spdthermo-orbitrap-fusion-lumos
BRM Complex in Arabidopsis Adopts ncBAF-like Composition and Requires BRD Subunits for Assembly and Stability2023Paulina Stachula, Katarzyna Kapela, Ewelina Malecka, Kamila Jaronczyk, Jacek Patryn, Nina Siwirykow, Maria Bucholc, Malgorzata Marczak, Maciej Kotlinski and Rafal ArchackiUniversity of Warsaw & Institute of Biochemistry and Biophysics PAS

Read publication here

extended-methodthermo-orbitrap-exploris-480
Exploiting Multi-Omics Profiling and Systems Biology to Investigate Functions of TOMM342023Ekaterina V. Poverennaya, Mikhail A. Pyatnitskiy, Georgii V. Dolgalev, Viktoria A. Arzumanian, Olga I. Kiseleva, Ilya Yu. Kurbatov, Leonid K. Kurbatov, Igor V. Vakhrushev, Daniil D. Romashin, Yan S. Kim and Elena A. PonomarenkoInstitute of Biomedical Chemistry Moscow & Faculty Of Computer Science & National Research University Higher School of Economics Moscow

Read publication here

30-spdthermo-q-exactive
β-oxidation–polyhydroxyalkanoates synthesis relationship in Pseudomonas putida KT2440 revisited2023Si Liu, Tanja Narancic, Jia‑Lynn Tham & Kevin E. O’ConnorUniversity College Dublin

Read publication here

30-spdtimstof-pro
Unique DUOX2+ACE2+ small cholangiocytes are pathogenic targets for primary biliary cholangitis2023Xi Li, Yan Li, Jintao Xiao, Huiwen Wang, Yan Guo, Xiuru Mao, Pan Shi, Yanliang Hou, Xiaoxun Zhang, Nan Zhao, Minghua Zheng, Yonghong He, Jingjing Ding, Ya Tan, Min Liao, Ling Li, Ying Peng, Xuan Li, Qiong Pan, Qiaoling Xie, Qiao Li, Jianwei Li, Ying Li, ZDaping Hospital, Xiangya Hospital, Central South University, the First Affiliated Hospital of Wenzhou Medical University, ale University School of Medicine,

Read publication here

bruker-timstof
Extending the Range of SLIM-Labeling Applications: From Human Cell Lines in Culture to Caenorhabditis elegans Whole-Organism Labeling2023Laurent Lignieres, Nicolas Sénécaut, Tien Dang, Laura Bellutti, Marion Hamon, Samuel Terrier, Véronique Legros, Guillaume Chevreux, Gaëlle Lelandais, René-Marc Mege, Julien Dumont, and Jean-Michel CamadroUniversité Paris Cité, Institut de Biologie Physico-Chimique, Institut de Biologie Physico-Chimique Véronique Legros, Guillaume Chevreux, Gaëlle Lelandais, René-Marc Mege, ̀ Julien Dumont,Institut de Biologie Physico-Chimique, Institut de Biologie Intégra

Read publication here

30-spdthermo-orbitrap-fusion
Noncanonical splicing junctions between exons and transposable elements represent a source of immunogenic recurrent neo-antigens in patients with lung cancer2023Antonela Merlotti, Benjamin Sadacca, Yago A. Arribas, Mercia Ngoma, Marianne Burbage, Christel Goudot, Alexandre Houy, Ares Rocañín-Arjó, Ana Lalanne, Agathe Seguin-Givelet, Marine Lefevre, Sandrine Heurtebise-Chrétien, Blandine Baudon, Giacomo Oliveira,Université Paris Sciences et Lettres, Laboratory of Clinical immunology, Institute Mutualiste Montsouris, Dana-Farber Cancer Institute, Institut d’Investigacions Biomèdiques de Barcelona-CSIC, Dana-Farber Cancer Institute

Read publication here

thermo-q-exactive
Quantitative multi-organ proteomics of fatal COVID-19 uncovers tissue-specific effects beyond inflammation2023Lisa Schweizer, Tina Schaller, Maximilian Zwiebel, Özge Karayel, Johannes B. Müller-Reif, Wen-Feng Zeng, Sebastian Dintner, Klaus Hirschbühl, Bruno Märkl, Rainer Claus, Matthias MannMax-Planck Institute of Biochemistry, University Medical Center Augsburg,

Read publication here

30-spdthermo-orbitrap-exploris-480
PRMT5-mediated regulatory arginine methylation of RIPK32023Chanchal Chauhan, Ana Martinez-Val, Rainer Niedenthal, Jesper Velgaard Olsen, Alexey Kotlyarov, Simon Bekker-Jensen, Matthias Gaestel & Manoj B. MenonHannover Medical School, University of Copenhagen, Indian Institute of Technology Delhi

Read publication here

60-spdthermo-orbitrap-exploris-480
Identification of Highly Sensitive Pleural Effusion Protein Biomarkers for Malignant Pleural Mesothelioma by Affinity-Based Quantitative Proteomics2023Nicolai B. Palstrøm, Martin Overgaard, Peter Licht , Hans C. BeckOdense University Hospital, University of Southern Denmark,

Read publication here

60-spdthermo-altis-triple-quadrupole
Differential proteomic profile of lumbar and ventricular cerebrospinal fluid2023Nina Rostgaard, Markus Harboe Olsen, Maud Ottenheijm, Lylia Drici, Anja Hviid Simonsen, Peter Plomgaard, Hanne Gredal, Helle Harding Poulsen, Henrik Zetterberg, Kaj Blennow, Steen Gregers Hasselbalch, Nanna MacAulay, Marianne JuhlerCopenhagen University Hospital, University of Copenhagen, University of Gothenburg,

Read publication here

60-spdthermo-orbitrap-exploris-480
Recent advances in the field of single-cell proteomics2023Valdemaras Petrosius and Erwin M. SchoofTechnical University of Denmark,

Read publication here

whisper-20spd whisper-40spd
Comparative proteome and transcriptome analyses of the response of postharvest pears to Penicillium expansum infection2023Meiqiu Xu, Esa Abiso Godana, Solairaj Dhanasekaran, Xiaoyun Zhang, Qiya Yang, Lina Zhao and Hongyin ZhangJiangsu University, Luoyang Normal University

Read publication here

timstof-pro-2
Chromatographic separation of peptides and proteins for characterization of proteomes2022Yu Liang, Lihua Zhang and Yukui ZhangChinese Academy of Science, ,

Read publication here

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Insight into the antibacterial mechanism of Cuenriched sol–gel coatings employing proteomics2022Francisco Romero-Gavilán, Iñaki García-Arnáez, Andreia Cerqueira, Loredana Scalschi, Begonya Vicedo, Alejandro Villagrasa, Raúl Izquierdo, Mikel Azkargorta, Félix Elortza, Mariló Gurruchaga, Isabel Goñi and Julio SuayUniversitat Jaume I, Universidad del País Vasco, CIC bioGUNE

Read publication here

timstof-pro
Proteomic evaluation of human osteoblast responses to titanium implants over time2022Francisco Romero-Gavilán, Andreia Cerqueira, Iñaki García-Arnáez, Mikel Azkargorta, Félix Elortza, Marilo Gurruchaga, Isabel Goñi and Julio SuayUniversitat Jaume I, Universidad del País Vasco, CIC bioGUNE

Read publication here

30-spdtimstof-pro
A targeted multiplex mass spectrometry method for quantitation of abundant matrix and cellular proteins in formalin-fixed paraffin embedded arterial tissue2022Anne-Sofie Faarvang Thorsen, Lars Peter Schødt Riber, Lars Melholt Rasmussen and Martin OvergaardOdense University Hospital. University of Southern Denmark. Steno Diabetes Center Odense.

Read publication here

60-spdthermo-altis-triple-quadrupole
Hybrid-DIA: Intelligent Data Acquisition for Simultaneous Targeted and Discovery Phosphoproteomics in Single Spheroids2022Ana Martínez-Val, Kyle Fort, Claire Koenig, Leander Van der Hoeven, Giulia Franciosa, Thomas Moehring , Yasushi Ishihama, Yu-ju Chen, Alexander Makarov, Yue Xuan and Jesper V. OlsenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen. Thermo Fisher Scientific. Kyoto University. Academia Sinica

Read publication here

whisper-40spdthermo-orbitrap-exploris-480
MS-DAP Platform for Downstream Data Analysis of Label-Free Proteomics Uncovers Optimal Workflows in Benchmark Data Sets and Increased Sensitivity in Analysis of Alzheimer’s Biomarker Data2022Frank Koopmans, Ka Wan Li, Remco V. Klaassen, and August B. SmitVU University

Read publication here

30-spdtimstof-pro
Ultra-high sensitivity for targeted clinical proteomics using Evosep-MRM2022Angela McArdle, Dorte B. Bekker-Jensen, Bharath Kumar Raghuraman, Nicolai BacheEvosep Biosystems

Read poster here

whisperagilent-6495-triple-quadrupole
A complete and automated sample preparation strategy for high-throughput and standardized proteomics, applied to a clinical cohort of patient plasma samples2022Dorte B. Bekker-Jensen, Florian Harking, Magnus Huusfeldt, Ole Østergaard, Lasse Falkenby, Line Vinderslev Iversen, Jakob Bunkenborg, Angie McArdle, Ole B. Hørning, Nicolai Bache, Jesper V. OlsenEvosep Biosystems, University of Copenhagen, Statens Serum Institut, Bispebjerg University Hospital,,

Read poster here

500-spd whisper-40spdbruker-timstof-pro
Pushing the boundaries for robust and high-throughput single cell analysis with Whisper Flow technology powered by dia-PASEF2022Dorte B. Bekker-Jensen, Christoph Krisp, David Hartlmayr, Anjali Seth, Ole B. Hørning, Moritz Heusel, Magnus Huusfeldt, Andreia Almeida, Markus Lubeck, Gary Kruppa, Jarrod Sandow, Nicolai BacheEvosep Biosystems, Bruker Daltonics GmBH & Co. KG, Cellenion, IonOpticks, Bruker s.r.o, Brno

Read poster here

whisper-40spdbruker-timstof-scp
Proteomic profiling of cerebrospinal fluid in pediatric myelin oligodendrocyte glycoprotein antibody-associated disease2022Yi‑Long Wang, Meng‑Ying Zhu, Zhe‑Feng Yuan, Xiao‑Yan Ren, Xiao‑Tong Guo, Yi Hua, Lu Xu, Cong‑Ying Zhao, Li‑Hua Jiang, Xin Zhang, Guo‑Xia Sheng, Pei‑Fang Jiang, Zheng‑Yan Zhao, Feng GaoZhejiang University School of Medicine

Read publication here

thermo-q-exactive
A complete, automated Opentrons OT-2 loading protocol for simplified sample loading of Evotip Pure2022Evosep, ,

Read application note here

100-spd 500-spd whisper-40spdbruker-timstof-pro
Rapid and robust PTM peptide mapping for biologics with the Evosep One and the SCIEX ZenoTOF 76002022Evosep, ,

Read application note here

100-spd 300-spd 60-spdsciex-zenotof-7600
Pushing the boundaries for robust and high-throughput single cell analysis2022Evosep

Read application note here

whisper-40spdbruker-timstof-scp
Temporal phosphoproteomics reveals WEE1-dependent control of 53BP1 pathway2022Valdemaras Petrosius, Jan Benada, Olaf Nielsen, Erwin Marten Schoof, Claus Storgaard SørensenUniversity of Copenhagen, Technical University of Denmark

Read publication here

30-spdthermo-fisher-ultimate-3000
Robust dimethyl-based multiplex-DIA workflow doubles single-cell proteome depth via a reference channel2023Marvin Thielert, Corazon Ericka Mae Itang, Constantin Ammar, Florian A Schober, Isabell Bludau, Patricia Skowronek, Maria Wahle, Wen-Feng Zeng, Xie-Xuan Zhou, Andreas-David Brunner, Sabrina Richter, Fabian J Theis, Martin Steger, Matthias MannMax Planck Institute of Biochemistry, Boehringer Ingelheim Pharma GmbH & Co, German Research Center for Environmental Health, Technical University of Munich, NEOsphere Biotechnologies GmbH, University of Copenhagen

Read publication here

whisper-40spdbruker-timstof-scp
Restoring cellular magnesium balance through Cyclin M4 protects against acetaminophen-induced liver damage2022Irene González-Recio, Jorge Simón, Naroa Goikoetxea-Usandizaga, Marina Serrano-Maciá, Maria Mercado-Gómez, Rubén Rodríguez-Agudo, Sofía Lachiondo Ortega, Clàudia Gil-Pitarch, Carmen Fernández-Rodríguez, Donatello Castellana, Maria U. Latasa, Leticia AbeciCIC bioGUNE, Universidad de Navarra, Marqués de Valdecilla University Hospital, McGill University, Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBERehd), University of the Basque Country (UPV/EHU), Silence Therapeutic

Read publication here

bruker-timstof-pro
Enhancing single-cell proteomics through tailored Data-Independent Acquisition and micropillar array-based chromatography2022Valdemaras Petrosius, Pedro Aragon-Fernandez, Nil Üresin, Teeradon Phlairaharn, Benjamin Furtwängler, Jeff op de Beeck, Simon Francis Thomsen, Ulrich auf dem Keller, Bo T. Porse, Erwin M. SchoofTechnical University of Denmark, University of Copenhagen

Read publication here

whisper-20spdthermo-orbitrap-eclipse-tribid
Characterization of TGF-β signaling in a human organotypic skin model reveals that loss of TGF-βRII induces invasive tissue growth2022Zilu Ye, Gülcan Kilic, Sally Dabelsteen, Irina N. Marinova, Jens F. B. Thøfner, Ming Song, Asha M. Rudjord-Levann, Ieva Bagdonaite, Sergey Y. Vakhrushev, Cord H. Brakebusch, Jesper V. Olsen, Hans H. WandallUniversity of Copenhagen

Read publication here

30-spdthermo-orbitrap-exploris-480
Two Subgroups within the GH43_36 α-l-Arabinofuranosidase Subfamily Hydrolyze Arabinosyl from Either Mono-or Disubstituted Xylosyl Units in Wheat Arabinoxylan2022Kai P. Leschonski, Svend G. Kaasgaard,Nikolaj Spodsberg, Kristian B. R. M. Krogh, Mirjam A. KabelNovozymes A/S, Wageningen University

Read publication here

bruker-timstof-pro
Plasma proteomic profling in postural orthostatic tachycardia syndrome (POTS) reveals new disease pathways2022Madeleine Johansson, HongYan, Charlotte Welinder, ÁkosVégvári, Viktor Hamrefors, Magnus Bäck, Richard Sutton, Artur FedorowskiSkåne University Hospital, Swedish National Infrastructure for Biological Mass Spectrometry, Karolinska Institutet, Lund University,

Read publication here

60-spdbruker-timstof-pro
Programmed death ligand 1 intracellular interactions with STAT3 and focal adhesion protein Paxillin facilitate lymphatic endothelial cell remodeling2022Johnathon B. Schafer, Erin D. Lucas, PhD, Monika Dzieciettkowska, Tadg Forward, Beth A. Jirón TamburiniUniversity of Colorado School of Medicine,

Read publication here

bruker-timstof-pro
Correlation between biological responses in vitro and in vivo to Ca-doped sol-gel coatings assessed using proteomic analysis2022I. García-Arnáeza, F. Romero-Gavilán, A. Cerqueira, F. Elortza, M. Azkargorta, F. Muñoz, M. Mata, J.J. Martín de Llano, J. Suay, M. Gurruchaga, I.GoñiaUniversity of the Basque Country, Universitat Jaume, Basque Research and Technology Alliance, Campus Universitario, iBoneLab SL, University of Valencia, Research Institute of the University Clinical Hospital of Valencia

Read publication here

30-spdbruker-timstof-pro
Slice-PASEF: fragmenting all ions for maximum sensitivity in proteomics2022Lukasz Szyrwiel, Ludwig Sinn, Markus Ralser, Vadim DemichevUniversitätsmedizin Berlin, University of Oxford

Read publication here

200-spdbruker-timstof-pro
Synchro-PASEF allows precursor-specific fragment ion extraction and interference removal in data-independent acquisition2022Patricia Skowronek, Florian Krohs, Markus Lubeck, Georg Wallmann, Ericka Itang, Polina Koval, Maria Wahle, Marvin Thielert, Florian Meier, Sander Willems, Oliver Raether, Matthias MannMax Planck Institute of Biochemistry, Bruker Daltonics GmbH & Co. KG Bremen, Kyiv Academic University, Jena University Hospital, Bruker Belgium, NNF Center for Protein Research,,

Read publication here

100-spd 60-spdbruker-timstof-pro
Enhanced drug delivery by a prodrug approach effectively relieves neuroinflammation in mice2022Ahmed Montaser, Janita Kuiri, Teemu Natunen, Pavel Hruska, David Potesil, Seppo Auriola, Mikko Hiltunen, Tetsuya Terasaki, Marko Lehtonen, Aaro Jalkanen, Kristiina M HuttunenUniversity of Eastern Finland, Masaryk University, Tohoku University,

Read publication here

Kinase Inhibitor Pulldown Assay (KiP) for Clinical Proteomics2022Alexander B Saltzman, Doug W Chan, Matthew V Holt, Junkai Wang, Eric J Jaehnig, Meenakshi Anurag, Purba Singh, Anna Malovannaya, Beom-Jun Kim, Matthew J EllisBaylor College of Medicine, MD Anderson Cancer Center, AstraZeneca,

Read publication here

30-spdthermo-orbitrap-exploris-480
On the potential of micro-flow LC-MS/MS in proteomics2022Yangyang Bian, Chunli Gao, Bernhard Kuster,Northwest University, Technical University of Munich

Read publication here

300-spdab-sciex-tripletof-6600
Autophagy regulates neuronal excitability by controlling cAMP/protein kinase A signaling at the synapse2022Melina Overhoff, Frederik Tellkamp, Simon Hess, Marianna Tolve, Janine Tutas, Marcel Faerfers, Lotte Ickert, Milad Mohammadi, Elodie De Bruyckere, Emmanouela Kallergi, Andrea Delle Vedove, Vassiliki Nikoletopoulou, Brunhilde Wirth, Joerg Isensee, Tim HuchUniversity of Cologne, University of Lausanne, Leibniz Institute for Molecular Pharmacology, German Center for Neurodegenerative Diseases

Read publication here

whisper-20spdthermo-q-exactive-480
A Parallelization Strategy for the Time Efficient Analysis of Thousands of LC/MS Runs in High-Performance Computing Environment2022Patrick van Zalm, Arthur Viodé, Kinga Smolen, Benoit Fatou, Arash Nemati Hayati, Christoph N. Schlaffner, Ofer Levy, Judith Steen, Hanno SteenBoston Children's Hospital

Read publication here

bruker-timstof-pro
2-O-Methylation of the second transcribed nucleotide within the mRNA 5 cap impacts the protein production level in a cell-specific manner and contributes to RNA immune evasion2022Karolina Drazkowska, Rafal Tomecki, Marcin Warminski, Natalia Baran, Dominik Cysewski, Anaıs Depaix, Renata Kasprzyk, Joanna Kowalska, Jacek Jemielity, Pawel J. SikorskiUniversity of Warsaw, Polish Academy of Sciences, Medical University of Bialystok

Read journal article here

30-spdthermo-orbitrap-exploris-480
Common variable immunodeficiency in two kindreds with heterogeneous phenotypes caused by novel heterozygous NFKB1 mutations2022Frederik Staels, Kerstin De Keukeleere, Matias Kinnunen, Salla Keskitalo, Flaminia Lorenzetti, Michiel Vanmeert, Teresa Prezzemolo, Emanuela Pasciuto, Eveline Lescrinier, Xavier Bossuyt, Margaux Gerbaux, Mathijs Willemsen, Julika Neumann, Sien Van Loo, AnKU Leuven, University of Helsinki, University Hospitals Leuven, Babraham Institute

Read publication here

60-spdbruker-timstof-pro
SARS-CoV-2 Production, Purification Methods and UV Inactivation for Proteomics and Structural Studies Inactivation for Proteomics and Structural Studies2022Zlatka Plavec, Aušra Domanska, Xiaonan Liu, Pia Laine, Lars Paulin, Markku Varjosalo, Petri Auvinen, Sharon G. Wolf, Maria Anastasina, Sarah J. ButcherMolecular and Integrative Biosciences Research Programme, University of Helsinki, Weizmann Institute pf Science,

Read publication here

60-spdbruker-timstof-pro
Optimizing data points per protein increases protein identifications while maintaining quantitative precision in short gradient data-independent acquisition proteomics2022Joerg Doellinger, Christian Blumenscheit, Andy Schneider, Peter LaschRobert Koch-Institute

Read publication here

60-spdbruker-timstof-pro
PKC isoforms activate LRRK1 kinase by phosphorylating conserved residues (Ser1064, Ser1074, and THR1075) within the COR GTPase domain2022Asad U. Malik, Athanasios Karapetsas, Raja S. Nirujogi, Sebastian Mathea, Prosenjit Pal, Pawel Lis, Matthew Taylor, Elena Purlyte, Robert Gourlay, Mark Dorward, Simone Weidlich, Rachel Toth, Nicole K. Polinski, Stefan Knapp, Francesca Tonelli & Dario R AlUniversity of Dundee, Collaborative Research Network, Johann Wolfgang Goethe University, AB Sciex

Read publication here

30-spdthermo-orbitrap-exploris-240
Endosomal Chemokine Receptor Signalosomes Regulate Central Mechanisms Underlying Cell Migration2022Hyunggu Hahn, Carole Daly, John Little IV, Nicole A. Perry Hauser, Asuka Inoue, Bianca Plouffe, Alex R. B. ThomsenNew York University College of Dentistry, Queen’s University Belfast, Columbia University Vagelos College of Physicians and Surgeons, Tohoku University

Read publication here

thermo-q-exactive-hf-x
Rapid profiling of protein complex re-organization in perturbed systems2022Isabell Blau, Charlotte Nicod, Claudia Martelli, Peng Xue, Moritz Heusel Andreas Fossati, Federico Uliana, Fabian Frommelt, Ruedi Aabersold, Ben C. CollinsETH Zürich, Max Planck Institute of Biochemistry, Lund University, University of California San Francisco, J. David Gladstone Institutes, Queen's University of Belfast

Read publication here

60-spdab-sciex-tripletof-6600
Cellular proteomic profiling using proximity labelling by TurboID-NES in microglial and neuronal cell lines2022Sydney Sunna, Christine Bowen, Hollis Zeng, Struti Rayaprolu, Prateek Kumar, Pritha Bagchi, Duc M. Duong, Sara Bitarafan, Aditya Natu, Levi Wood, Nicholas T. Seyfried, Srikant RangarajuEmory University, Georgia Institute of Technology

Read publication here

30-spdthermo-q-exactive
Structural studies reveal that endosomal cations promote formation of 2 infectious CVA9 A particles, facilitating RNA and VP4 release.2022Aušra Domanska, Zlatka Plavec, Visa Ruokolainen, Benita Löflund, Varpu Marjomäki, Sarah J ButcherFaculty of Biological and Environmental Sciences, Molecular and Integrative Bioscience Research Programme, and Helsinki Institute of Life Sciences-Institute of Biotechnology, University of Helsinki, Helsinki, Finland

Read publication here

60-spdbruker-timstof-pro
Extended detection of anabolics misuse in high-throughput doping controls with the Evosep One2022Evosep

Read application note

100-spd
The spike of SARS-CoV-2 promotes metabolic rewiring in hepatocytes2022Maria Mercado-Gómez, Endika Prieto-Fernández, Naroa Goikoetxea-Usandizaga, Laura Vila-Vecilla, Mikel Azkargorta. Miren Bravo, Marina Serrano-Maciá, Leire Egia-Mendikute, Rubén Rodríguez-Agudo, Sofia Lachiondo-Ortega, So Young Lee, Alvaro Eguileor GinéCIC bioGUNE, Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas, IIS Hospital La Fe, University of Valencia, Basque Foundation for Science, University of the Basque Country, Centro de Investigación Biomédica En Red de Enferme

Read publication here

30-spdbruker-timstof-pro
Biomarkers in Neurodegenerative Diseases: Proteomics Spotlight on ALS and Parkinson’s Disease2022Rekha Raghunathan, Kathleen Turajane and Li Chin WongInternational Journal of Molecular Sciences

Read publication here

Coordinated control of the ADP-heptose/ALPK1 signalling network by the E3 ligases TRAF6, TRAF2/c-IAP1 and LUBAC.2022Tom Snelling, Natalia Shpiro, Robert Gourlay, Frederic Lamoliatte and Philip CohenUniversity of Dundee

Read publication here

thermo-orbitrap-exploris-240
Analysis of context-specific KRAS-effectors (sub)complexes in Caco-2 cells2022Camille Ternet, Philipp Junk, Thomas Sevrin, Simona Catozzi, Giorgio Oliviero, Kieran Wynne and Christina KielUniversity College Dublin, University of Pavia

Read publication here

bruker-timstof-pro
The addition of FAIMS increases targeted proteomics sensitivity from FFPE tumor biopsies2022Steve Sweet, David Chain, WenYu, Philip Martin, Marlon Rebelatto, Andrew Chambers, Fabiola Cecchi and Yeoun Jin KimAstraZeneca

Read publication here

30-spdthermo-orbitrap-fusion-lumos
High-throughput mass spectrometry maps the sepsis plasma proteome and differences in response2022Yuxin Mi, Katie L Burnham, Philip D Charles, Raphael Heilig, Iolanda Vendrell, Justin Whalley, Hew D Torrance, David B Antcliffe, Shaun M May, Matt J Neville, Georgina Berridge. Paula Hutton, Cyndi Goh, Jayachandran Radhakrishnan, Alexey Nesvizhskii,University of Oxford, Wellcome Genome Campus, Imperial College London, Queen Mary University of London, NIHR Oxford Biomedical Research Centre, Oxford University Hospitals NHS Foundation Trust, University of Michigan, Imperial College Healthcare NHS Trust

Read publication here

100-spdbruker-timstof-pro
Widespread hydroxylation of unstructured lysine-rich protein domains by JMJD62022Matthew E. Cockman, Yoichiro Sugimoto, Hamish B. Pegg, Norma Masson, Eidarus Salah, Anthony Tumber, Helen R. Flynn, Joanna M. Kirkpatrick, Christopher J. Schofield and Peter J. RatcliffeFrancis Crick Institute

Read publication here

30-spdthermo-orbitrap-fusion-lumos
High throughput and high confidence sequence variant analysis in therapeutic antibodies using Evosep One liquid chromatography tandem mass spectrometry with synthetic heavy peptides2022Tyler Greer, Reid O'Brien Johnson, Song Nie, Milos Cejkov, Xiaojing Zheng & Ning LiRegeneron Pharmaceuticals Inc

Read publication here

30-spdthermo-orbitrap-fusion-lumos
Osteocytes Serve as a Reservoir for Intracellular Persisting Staphylococcus aureus Due to the Lack of Defense Mechanisms2022Marina Garcia-Moreno, Paul M. Jordan, Kerstin Günther, Therese Dau, Christian Fritzsch, Monika Vermes, Astrid Schoppa, Anita Ignatius, Britt Wildemann, Oliver Werz, Bettina Löffler & Lorena TuchscherrJena University Hospital, Friedrich Schiller University Jena, Leibniz Institute on Aging & University Medical Center Ulm

Read publication here

30-spdthermo-orbitrap-exploris-480
Neddylation tunes peripheral blood mononuclear cells immune response in COVID-19 patients2022Marina Serrano-Maciá, Sofia Lachiondo-Ortega, Paula Iruzubieta, Naroa Goikoetxea-Usandizaga, Alexandre Bosch, Leire Egia-Mendikute, Borja Jiménez-Lasheras, Mikel Azkargorta, Félix Elortza, Diana Martinez-Redondo, Begoña Castro, Juan J. Lozano, Ruben NogueCIC bioGUNE-BRTA, IDIVAL, CIC bioGUNE, CIBEREHD, University of Santiago de Compostela-Instituto de Investigación Sanitaria, Centro de Investigación Biomédica en Red, GAIN, Universidad de Cantabria, Ikerbasque & Basque Foundation for Science

Read publication here

30-spdbruker-timstof-pro
T-cell trans-synaptic vesicles are distinct and carry greater effector content than constitutive extracellular vesicles2022Pablo F. Céspedes, Ashwin Jainarayanan, Lola Fernández-Messina, Salvatore Valvo, David G. Saliba, Elke Kurz, Audun Kvalvaag, Lina Chen, Charity Ganskow, Huw Colin-York, Marco Fritzsche, Yanchun Peng, Tao Dong, Errin Johnson, Jesús A. Siller-Farfán, Omer DThe University of Oxford, Autónoma de Madrid, Centro Nacional de Investigaciones Cardiovasculares (CNIC), University of Oxford, Karolinska Institutet

Read publication here

60-spdbruker-timstof-pro
High-throughput quantitative proteomics using Zeno SWATH data-independent analysis (DIA) and the Evosep One system2022Ihor Batruch, Yves Le Blanc and Christie HunterSCIEX, , ,

Read publication here

100-spd 200-spd 30-spd 60-spdsciex-zenotof-7600
Rapid and in-depth coverage of the (phospho-)proteome with deep libraries and optimal window design for dia-PASEF2022Patricia Skowronek, Marvin Thielert, Eugenia Voytik, Maria C. Tanzer, Fynn M. Hansen, Sander Willems, Özge Karayel, Andreas-David Brunner, Florian Meier, Matthias MannMax Planck Institute of Biochemistry, Jena University Hospital, University of Copenhagen, ,

Read publication here

100-spd 30-spd 60-spdbruker-timstof-pro
Application of In-Cell Fast Photochemical Oxidation of Proteins for the Study of Organoids2022Raquel Shortt, Lisa M. JonesUniversity of Maryland, University of California

Read publication here

thermo-orbitrap-fusion-lumos
Brain proteome profling implicates the complement and coagulation cascade in multiple system atrophy brain pathology2022Rasmus Rydbirk, Ole Østergaard, Jonas Folke, Casper Hempel, Brian DellaValle, Thomas L. Andresen, Annemette Løkkegaard, Anne‑Mette Hejl, Matthias Bode, Morten Blaabjerg, Mette Møller, Erik H. Danielsen, Lisette Salvesen, Charlotte C. Starhof, Sara BechCopenhagen University Hospital, University of Copenhagen, Technical University of Denmark, GLX Analytix ApS, Odense University Hospital, Aarhus University Hospital

Read publication here

30-spdthermo-q-exactive-hf-x
Noninvasive proteomic biomarkers for alcohol-related liver disease2022Lili Niu , Maja Thiele , Philipp E. Geyer, Ditlev Nytoft Rasmussen, Henry Emanuel Webel, Alberto Santos, Rajat Gupta, Florian Meier , Maximilian Strauss , Maria Kjaergaard , Katrine Lindvig, Suganya Jacobsen, Simon Rasmussen , Torben Hansen , Aleksander KUniversity of Copenhagen, Max Planck Institute of Biochemistry, Odense University Hospital, University of Southern Denmark, Jena University Hospital, University of Oxford, Pfizer Worldwide Research and Development

Read publication here

60-spdthermo-orbitrap-exploris-480
Advances in data‐independent acquisition massspectrometry towards comprehensive digital proteomelandscape2022Reta Birhanu Kitata, Jhih‐Ci Yang, Yu‐Ju ChenAcademia Sinica, National Yang Ming Chiao Tung University, National Taiwan University

Read publication here

60-spdthermo-orbitrap-exploris-480
Engineered SH2 Domains for Targeted Phosphoproteomics2022Gregory D. Martyn, Gianluca Veggiani, Ulrike Kusebauch, Seamus R. Morrone, Bradley P. Yates, Alex U. Singer, Jiefei Tong, Noah Manczyk, Gerald Gish, Zhi Sun, Igor Kurinov, Frank Sicheri, Michael F. Moran, Robert L. Moritz and Sachdev S. SidhuUniversity of Toronto, Institute for Systems Biology Washington, Hospital for Sick Children Toronto, Mount Sinai Hospital, Cornell University

Read publication here

Proteomic phenotype of cerebral organoids derived from autism spectrum disorder patients reveal disrupted energy metabolism, cellular components, and biological processes2022Mirolyuba Ilieva, Blanca Irene Aldana, Kasper Tore Vinten, Sonja Hohmann, Thomas William Woofenden, Renate Lukjanska, Helle S Waagepetersen, Tanja Maria MichelUniversity of Southern Denmark, Odense University Hospital, Aalborg University, University of Copenhagen

Read publication here

30-spdthermo-orbitrap-fusion
Pancreatic INS-1 β-Cell Response to Thapsigargin and Rotenone: A Comparative Proteomics Analysis Uncovers Key Pathways of β-Cell Dysfunction2022Mehari Muuz Weldemariam, Jongmin Woo & Qibin ZhangUniversity of North Carolina at Greensboro

Read publication here

Proteomics of human biological fluids for biomarker discoveries: technical advances and recent applications2022Loïc Dayon, Ornella Cominetti & Michael AffolterProteomics, Bioanalytics Department, Nestlé Institute of Food Safety & Analytical Sciences, Institut des Sciences et Ingénierie Chimiques

Read publication here

Evaluation of the Suitability of Dried Saliva Spots for In-Depth Proteome Analyses for Clinical Applications2022Hironori Sato, Daisuke Nakajima, Masaki Ishikawa, Ryo Konno, Ren Nakamura, Osamu Ohara, & Yusuke KawashimaDepartment of Applied Genomics, Kazusa DNA Research Institute, Department of Pediatrics, Graduate School of Medicine, Chiba University

Read publication here

Inflammation-induced downregulation of succinate dehydrogenase regulates adrenocortical function2022Ivona Mateska, Anke Witt, Eman Hagag, Anupam Sinha, Canelif Yilmaz, Evangelia Thanou, Na Sun, Ourania Kolliniati, Maria Patschin, Heba Abdelmegeed, Holger Henneicke, Waldemar Kanczkowski, Ben Wielockx, Christos Tsatsanis, Andreas Dahl, Axel Walch, Ka WanTechnische Universität Dresden, Germany, Vrije Universiteit, Netherlands, Helmholtz Centrum München, Germany, University of Crete, Greece

Read publication here

30-spdbruker-timstof-pro
Zwitter-ionic monolith-based spintip column coupled with Evosep One liquid chromatography for high-throughput proteomic analysis2022Yiran Su, Xi Wang, Yun Yang, Lijun Yang, Ruilian Xu, Ruijun TianSouthern Univrsity of Science and Technology, China, Jinan University, China,

Read publication here

whisper-20spdbruker-timstof-pro
Ultra sensitive and high throughput proteomics on the standardized Evosep One platform2021Jesper Olsen, Erwin M. SchoofUniversity of Copenhagen, Technical University of Denmark,

Watch webinar here

whisper-20spd whisper-40spdthermo-orbitrap-exploris-480
A Non-Hazardous Deparaffinization Protocol Enables Quantitative Proteomics of Core Needle Biopsy-Sized Formalin-Fixed and Paraffin-Embedded (FFPE) Tissue Specimens2022Georgia Mitsa, Qianyu Guo, Christophe Goncalves, Samuel E J Preston, Vincent Lacasse, Adriana Aguilar-Mahecha, Naciba Benlimame, Mark Basik, Alan Spatz, Gerald Batist, Wilson H Miller Jr, Sonia V Del Rincon, René P Zahedi, Christoph H BorchersInternational Journal of Molecular Sciences

Read publication here

Integrative analysis of non-small cell lung cancer patient-derived xenografts identifies distinct proteotypes associated with patient outcomes2022Shideh Mirhadi, Shirley Tam, Quan Li, Nadeem Moghal, Nhu-An Pham, Jiefei Tong, Brian J. Golbourn, Jonathan R. Krieger, Paul Taylor, Ming Li, Jessica Weiss, Sebastiao N. Martins-Filho ,Vibha Raghavan, Yasin Mamatjan, Aafaque A. Khan, Michael Cabanero, ShinNature Communications

Read publication here

30-spdthermo-orbitrap-fusion-lumos
DebaryOmics: an integrative –omics study to understand the halophilic behaviour of Debaryomyces hansenii2022Clara Navarrete, Benjamín J. Sánchez, Simonas Savickas, José Luis Martínez RuizDepartment of Biotechnology and Biomedicine,Technical University of Denmark

Read publication here

30-spdthermo-orbitrap-exploris-480
DNA damage contributes to neurotoxic inflammation in Aicardi-Goutières syndrome astrocytes2022Anna Maria Sole Giordano, Marco Luciani, Francesca Gatto, Monah Abou Alezz, Chiara Beghè, Lucrezia Della Volpe, Alessandro Migliara, Sara Valsoni, Marco Genua, Monika Dzieciatkowska, Giacomo Frati, Julie Tahraoui-Bories, Silvia Clara Giliani, Simona OrcesJournal of Experimental Medicine

Read publication here

bruker-timstof-pro
Chemical probing provides insight into the native assembly state of a bacterial microcompartment2022Daniel S. Trettel, William Resager, Beatrix M. Ueberheide, Conor C. Jenkins, Wade C.WinklerUniversity of Maryland, New York University Grossman School of Health, New York University Grossman School of Medicine

Read publication here

APP and DYRK1A regulate axonal and synaptic vesicle protein networks and mediate Alzheimer’s pathology in trisomy 21 neurons2022Chun-I Wu, Elizabeth A. Vinton, Richard V. Pearse II, Keunjung Heo, Aimee J. Aylward, Yi-Chen Hsieh, Yan Bi, Sopefoluwa Adeleye, Seeley Fancher, Duc M. Duong, Nicholas T. Seyfried, Thomas L. Schwarz & Tracy L. Young-PearseMolecular Psychiatry

Read publication here

Nano-LC: An updated review2022Lian Shan, Barry R JonesLC-MS Biologics, QSquared Solutions

Read publication here

Development of Fast Photochemical Oxidation of Proteins for in Vivo Modification in Caenorhabditis elegans2022Jessica Arlett EspinoUniversity of Maryland,

Read publication here

thermo-orbitrap-fusion-lumos thermo-q-exactive-hf
Protocol to characterize mitochondrial supercomplexes from mouse tissues by combining BN-PAGE and MS-based proteomics2021Roger Moreno-Justicia, Alba Gonzalez-Franquesa, Ben Stocks, Atul S. DeshmukhNovo Nordisk Foundation (NNF), Copenhagen Denmark

Read publication here

thermo-q-exactive-hf-x
Chaperone-Mediated Autophagy Controls Proteomic and Transcriptomic Pathways to Maintain Glioma Stem Cell Activity2022Jaione Auzmendi-Iriarte, Maddalen Otaegi-Ugartemendia, Estefania Carrasco-Garcia, Mikel Azkargorta, Antonio Diaz, Ander Saenz-Antonanzas, Joaquin Andrés Andermatten, Mikel Garcia-Puga, Idoia GarciaUniversity of the Basque Country

Read publication here

bruker-timstof-pro
Robust and high-throughput single cell proteomics with the Evosep One2022Evosep

Read application note

whisper-40spd
Comprehensive proteomics with 8.000 proteins identified with DIA-PASEF using the 30 samples per day method2022Evosep

Read application note

30-spd
A semi automated AssayMAP bravo protocol for robust Evotip loading and high-throughput analysis on the Evosep One2022Evosep

Read application note

Improve and enhance your proteome coverage with the performance column for our long methods2022Evosep,

Read application note

30-spd extended-methodbruker-timstof-pro
ASMS 2022 highlights: Robust and high-throughput analysis with ultra-high sensitivity2022Dorte Bekker-Jensen, Angela Mc Ardle, Nicolai BacheEvosep

Watch webinar

High sensitivity limited material proteomics empowered by data- independent acquisition on linear ion traps2022Teeradon Phlairaharn, Lukas R. Woltereck, Samuel Grégoire, Benjamin Furtwängler, Erwin M. SchoofTechnical University of Denmark,

Read publication here

whisper-20spd whisper-40spdthermo-orbitrap-eclipse-tribid
Transcription factor-driven coordination of cell cycle exit and lineage-specification in vivo during granulocytic differentiation2022Kim Theilgaard-Mönch, Sachin Pundhir, Kristian Reckzeh, Jinyu Su, Marta Tapia, Benjamin Furtwängler, Johan Jendholm, Janus Schou Jakobsen, Marie Sigurd Hasemann, Kasper Jermiin Knudsen, Jack Bernard Cowland, Anna Fossum, Erwin SchoofUniversity of Copenhagen, Technical University of Denmark

Read publication here

whisper-20spdthermo-orbitrap-eclipse-tribid
Using Targeted Liquid Chromatography-Tandem Mass Spectrometry to Rapidly Detect β-Lactam, Aminoglycoside, and Fluoroquinolone Resistance Mechanisms in Blood Cultures Growing E. coli or K. pneumoniae2022Dimard E. Foudraine, Lennard J. M. Dekker, Nikolaos Strepis, Stan J. Nispeling, Merel N. Raaphorst, Wendy Kloezen, Piet Colle, Annelies Verbon, Corné H. W. Klaassen, Theo M. Luider, Wil H. F. GoessensErasmus MC,

Read publication here

100-spdthermo-orbitrap-fusion thermo-q-exactive
Profiling the Plasma Apolipoproteome of Normo- and Hyperlipidemic Mice by Targeted Mass Spectrometry2022Lasse Bach Steffensen, Jannik Larsen, Didde Riisager Hansen, Thi My Linh Tha, Niels Strømvig Larsen, Hans Christian Beck, Lars Melholt Rasmussen, Martin OvergaardUniversity of Southern Denmark (SDU), Odense

Read publication here

Antimicrobial resistance with the Evosep One2022Dimard Foudraine, Florence Roux DalvaiErasmus MC, Laval University

Watch webinar

Toxoplasma gondii ROP1 subverts murine and human innate immune restriction2022Simon Butterworth, Francesca Torelli, Eloise J. Lockyer, Jeanette Wagener, Ok-Ryul Song, Malgorzata Broncel, Matt R. G. Russell, Joanna C. Young, Moritz TreeckThe Francis Crick Institute, London.

Read publication here

30-spdthermo-orbitrap-fusion-lumos
A fast and sensitive absolute quantification assay for the detection of sars-cov-2 peptides using parallel reaction monitoring mass spectrometry2022Akshada Gajbhiye, Atakan Nalbant, Tiaan Heunis, Frances Sidgwick, Andrew Porter, Yusri Taha, Matthias TrostNewcastle University

Read publication here

200-spdthermo-q-exactive-hf
ABPP-HT* – Deep meets fast for activity-based profiling of deubiquitylating enzymes using advanced DIA and DDA mass spectrometry methods2022Hannah B. L. Jones, Raphael Heilig, Simon Davis, Roman Fischer, Benedikt M. Kessler, Adán Pinto-FernandezUniversity of Oxford

Read publication here

100-spdbruker-timstof-pro
Numb exon 9 inclusion regulates Integrinβ5 surface expression and promotes breast cancer metastasis2022Yangjing Zhang, Sascha E. Dho, Kamal Othman, Craig D. Simpson, Jessica Lapierre, Andrew Bondoc & C. Jane McGladeDepartment of Medical Biophysics, University of Toronto., The Arthur and Sonia Labatt Brain Tumour Research Centre., SPARC BioCentre, The Hospital for Sick Children.

Read publication here

Beta thalassemia minor is a beneficial determinant of red blood cell storage lesion2022Vassilis L. Tzounakas, Alkmini T. Anastasiadi, Davide Stefanoni, Francesca Cendali, Lorenzo Bertolone, Fabia Gamboni, Monika Dzieciatkowska, Pantelis Rousakis, Athina Vergaki, Vassilis Soulakis, Ourania E. Tsitsilonis, Konstantinos Stamoulis, Issidora S.Department of Biology, Section of Cell Biology and Biophysics, School of Science, National and Kapodistrian University of Athens., Department of Biochemistry and Molecular Genetics, University of Colorado, School of Medicine-Anschutz Medical Campus.

Read publication here

bruker-timstof-pro
High-Field Asymmetric Waveform Ion Mobility Spectrometry and Parallel Reaction Monitoring Increases Sensitivity for Clinical Biomarker Quantitation from FormalinFixed, Paraffin-Embedded Tumor Biopsies2022Steve Sweet, David Chain, Wen Yu, Philip Martin, Marlon Rebelatto, Andrew Chambers,1 Fabiola Cecchi, Yeoun Jin KimTranslational Medicine, Oncology R&D, Data Science and AI, BioPharmaceuticals R&D, AstraZeneca, Gaithersburg, MD

Read publication here

thermo-orbitrap-fusion-lumos
The setup and optimization of a complete global proteomics two-dimensional liquid chromatography system, using Spider Fractionation2021Eris Aas BakketeigUniversity of Oslo, Oslo, Norway

Read publication here

extended-methodthermo-q-exactive-hf
Doxycycline Alters the Porcine Renal Proteome and Degradome during Hypothermic Machine Perfusion2022Leonie van Leeuwen, Leonie H. Venema, Raphael Heilig, Henri G. D. Leuvenink, Benedikt M. KesslerUniversity of Groningen, Groningen, The Netherlands, Target Discovery Institute, University of Oxford, Oxford, UK, Chinese Academy of Medical Sciences Oxford Institute, University of Oxford, Oxford, UK

Read publication here

bruker-timstof-pro
P018 Proteomic profile of serum and urine in newly diagnosed patients with Inflammatory Bowel Disease: new approach for biomarker discovery2022Montse Baldan Martin, Mikel Azkargorta Mujika, Lorena Ortega-MorenoHospital Universitario de La Princesa, CIC bioGune, Bilbao, Spain

Read publication here

bruker-timstof-pro
Recent Developments in Clinical Plasma Proteomics—Applied to Cardiovascular Research2022Nicolai Bjødstrup Palstrøm, Rune Matthiesen, Lars Melholt Rasmussen, Hans Christian BeckOdense University Hospital, Odense, Denmark, Universidade NOVA de Lisboa, Lisbon, Portugal

Read publication here

Proteomics based markers of clinical pain severity in juvenile idiopathic arthritis2022Hanne Van Der Heijden, Benoit Fatou, Kacie Hoyt, Benjamin Goodlett, Camilo Jaimes, Hanno Steen, Jaymin UpadhyayBoston Children’s Hospital MA, USA, Maastricht University, Maastricht, The Netherlands, University of Amsterdam, Amsterdam, The Netherlands, BioSAS Consulting, Inc, Wellesley, MA, USA, McLean Hospital, Harvard Medical School, MA, Belmont, USA

Read publication here

60-spdbruker-timstof-pro
Structural mechanism for the selective phosphorylation of DNA-loaded MCM double hexamers by the Dbf4-dependent kinase2021Julia F. Greiwe, Thomas C. R. Miller, Julia Locke, Fabrizio Martino, Steven Howell, Anne Schreiber, Andrea Nans, John F. X. Diffley & Alessandro CostaThe Francis Crick Institute, London, UK

Read publication here

30-spdthermo-orbitrap-lumos
FASN-dependent de novo lipogenesis is required for brain development2022Daniel Gonzalez-Bohorquez, Isabel M. Gallego López, Baptiste N. Jaeger, Sibylle Pfammatter, Megan Bowers, Clay F. Semenkovich & Sebastian JessbergerUniversity of Zurich, Switzerland. University School of Medicine, St. Louis, US

Read application note here

extended-methodbruker-timstof-pro
Hyperinflammatory environment drives dysfunctional myeloid cell effector response to bacterial challenge in COVID-192022Srikanth Mairpady Shambat, Alejandro Gómez-Mejia, Tiziano A. Schweizer, Markus Huemer, Chun-Chi Chang, Claudio Acevedo, Judith Bergada-Pijuan, Clément Vulin, Daniel A. Hofmaenner, Thomas C. Scheier, Sanne Hertegonne, Elena Parietti, Nataliya Miroshnikova,University Hospital of Zurich, University of Zurich, Switzerland

Read application note here

30-spdbruker-timstof-pro
Introducing Evotip Pure: A new generation of Evotip – It’s all in the tip2022Nicolai Bache, Dorte Bekker-JensenEvosep

Watch webinar

Ultra-high sensitivity proteomics on the timsTOF SCP2021Nagarjuna Nagaraj, Thomas Kosinski, Amalia Apalategui Pierre-Olivier Schmit, Markus Lubeck, Oliver Raether & Gary KruppaBruker, Germany.

Read application note here

whisper-40spdbruker-timstof-scp
The social architecture of an in-depth cellular protein interactome2021André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau & Matthias MannMax-Planck Institute of Biochemistry, Martinsried, Germany

Read publication here

60-spdbruker-timstof-pro
Data independent acquisition enables deep and fast label-free dynamic organellar mapping2021Julia P. Schessner, Vincent Albrecht, Alexandra K. Davies, Pavel Sinitcyn & Georg H.H. BornerMax-Planck Institute of Biochemistry, Martinsried, Germany,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Fully Automated High-Throughput Host Cell Protein Analysis of Highly Diverse Samples2021Anders Giessing

Read application note here

200-spdbruker-timstof
Evotip Pure: A new generation of Evotip2022Evosep

Download brochure

Unleash the power of DIA2022Patricia Skowronek, Yves Le Blanc, Ihor BatruchMax Planck Institute of Biochemistry, Sciex

Watch webinar

Ultra-high sensitivity mass spectrometry quantifies single-cell proteome changes upon perturbation2020Andreas-David Brunner, Marvin Thielert, Catherine Vasilopoulou, Constantin Ammar, Fabian Coscia, Andreas Mund, Ole B. Horning, Nicolai Bache, Amalia Apalategui, Markus Lubeck, Oliver Raether, Melvin A. Park, Sabrina Richter, David S. Fischer, Fabian J. ThMax Planck Institute of Biochemistry, Martinsried, Germany. Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark. Evosep Biosystems, Denmark. Bruker Daltonik, Germany and United States. Helmholtz Zentrum München, Germany.,

Download publication or learn more on our website

whisper-40spdbruker-timstof-pro bruker-timstof-scp
Proteomics at the single cell level with Evosep Whisper and the timsTOF SCP2022Bruker Daltonics

Read publication here

whisper-40spdbruker-timstof-pro
Evosep One in the clinical biochemistry lab2022Nicolai Jacob Wewer Albrechtsen, Martin OvergaardOdense University Hospital, University of Southern Denmark, NNF center for protein research, University of Copenhagen

Watch webinar

A beginner’s guide to Evosep2022Nicolai Bache & Ireshyn GovenderEvosep, Resyn Biosciences

Watch webinar

Whisper is here2021Christoph Krisp & Angela KruseBruker, Vanderbilt University

Watch webinar

FFPE Tissue Analysis on the Evosep One2021Bernhard Kuster & Lisa SchweizerTechnical University of Munich, Max Planck Institute of Biochemistry

Watch webinar

Automated sample prep workflows2021Philipp E. Geyer & Dorte Bekker-JensenOmicera Diagnostics, Evosep

Watch webinar

Development of a Standardized Microflow LC Gradient to Enable Sensitive and Long-Term Detection of Synthetic Anabolic-Androgenic Steroids for High-Throughput Doping Controls2021Vivian Delcourt, Patrice Garcia, Isabelle Pottier, Nasrine Mansoibou, Nicolai Bache, Yohan Glavieux, Benjamin Chabot, Isabelle Perot, Isabelle Perot, François André, Benoit Loup, Agnès Barnabé, Marie-Agnès Popot & Ludovic Bailly-ChouriberryGIE-LCH, Laboratoire Des Courses Hippiques, France. Evosep.

Read publication here

high-organic-methodthermo-q-exactive-hf
Plasma extracellular vesicles in people living with HIV and type 2 diabetes are related to microbial translocation and cardiovascular risk2021Beate Vestad, Tuula A. Nyman, Malene Hove‑Skovsgaard, Maria Stensland, Hedda Hoel, Anne‑Marie Siebke Trøseid, Trude Aspelin, Hans Christian D. Aass, Maija Puhka, Johannes R. Hov, Susanne Dam Nielsen, Reidun Øvstebø & Marius TrøseidOslo University Hospital Rikshospitalet, Oslo, Norway. University of Oslo, Oslo, Norway. Norwegian Society for Extracellular Vesicles, Oslo, Norway. University Hospital of Copenhagen Rigshospitalet, Copenhagen, Denmark. Lovisenberg Diaconal Hospital, Oslo

Read publication here

30-spdthermo-q-exactive-hf
DebaryOmics: an integrative –omics study to understand the halophilic behaviour of Debaryomyces hansenii2021Clara Navarrete, Benjamín J. Sánchez, Simonas Savickas, José L. MartínezTechnical University of Denmark. Denmark.

Read publication here

30-spdthermo-orbitrap-exploris-480
Evaluation of Disposable Trap Column nanoLC–FAIMS–MS/MS for the Proteomic Analysis of FFPE Tissue2021Stephan Eckert, Yun-Chien Chang, Florian P. Bayer, Matthew The, Peer-Hendrik Kuhn, Wilko Weichert & Bernhard KusterTechnical University of Munich, Munich, Germany., ,

Read publication here

30-spd 60-spd extended-methodthermo-orbitrap-exploris-480
High-Throughput Drug Discovery with the Evosep One2021Casimir Bamberger & Tanveer S. BatthScripps Research Institute & Novo Nordisk Foundation Center for Protein Research

Watch webinar

30-spdthermo-orbitrap-exploris-480
Targeted Workflows with Evosep One2021Michael Maccoss & Vivian DelcourtUniversity of Washington & Laboratoire Des Courses Hippiques

Watch webinar

high-organic-method
Plasma Proteomics with the Evosep One2021Roman Fischer & Lili NiuUniversity of Oxford & Novo Nordisk Foundation Center for Protein Research,

Watch webinar

30-spdbruker-timstof-pro thermo-orbitrap-exploris-480
Discovery Proteomics for COVID-19: Where We Are Now2021Angela McArdle, Kirstin E. Washington, Blandine Chazarin Orgel, Aleksandra Binek, Danica-Mae Manalo, Alejandro Rivas, Matthew Ayres, Rakhi Pandey, Connor Phebus, Koen Raedschelders, Justyna Fert-Bober & Jennifer E Van EykCedars-Sinai Medical Center, Los Angeles, California, United States

Read publication here

AlphaTims: Indexing Trapped Ion Mobility Spectrometry–TOF Data for Fast and Easy Accession and Visualization2021Sander Willems, Eugenia Voytik, Patricia Skowronek, Maximilian T. Strauss & Matthias MannMax Planck Institute of Biochemistry, Martinsried, Germany. OmicEra Diagnostics GmbH, Planegg, Germany. University of Copenhagen, Copenhagen, Denmark,

Read publication here

200-spd 60-spdbruker-timstof-pro
Deep neural network for detecting arbitrary precision peptide features through attention based segmentation2021Fatema Tuz Zohora, M. Ziaur Rahman, Ngoc Hieu Tran, Lei Xin, Baozhen Shan & Ming LiUniversity of Waterloo, Waterloo, Canada. Bioinformatics Solutions Inc., Waterloo, Canada.

Read publication here

A deeper look at carrier proteome effects for single-cell proteomics2021Zilu Ye, Tanveer Batth, Patrick L. Rüther, Jesper V. OlsenUniversity of Copenhagen

Read publication here

30-spdthermo-orbitrap-exploris-480
Time evolution of PEG-shedding and serum protein coronation determines the cell uptake kinetics and delivery of lipid nanoparticle formulated mRNA2021A. Gallud, M. J. Munson, K. Liu, A. Idström, H. M. G. Barriga, S. R. Tabaei, N. Aliakbarinodehi, M. Ojansivu, Q. Lubart, J. J. Doutch, M. N. Holme, L. Evenäs, L. Lindfors, M. M. Stevens, A. Collén, A. Sabirsh, F. Höök, E. K. Esbjörner.Chalmers University of Technology, Gothenburg, Sweden. AstraZeneca, Gothenburg, Sweden. Karolinska Institute, Stockholm, Sweden. Rutherford Appleton Laboratory, Didcot, UK. Imperial College London, UK.

Read publication here

30-spdthermo-q-exactive-hf
PD-L1 Overexpression, SWI/SNF Complex Deregulation, and Profound Transcriptomic Changes Characterize Cancer-Dependent Exhaustion of Persistently Activated CD4+ T Cells2021Iga Jancewicz, Joanna Szarkowska, Ryszard Konopinski, Malgorzata Stachowiak, Monika Swiatek, Katarzyna Blachnio, Szymon Kubala, Paulina Oksinska, Pawel Cwiek, Natalia Rusetska, Agnieszka Tupalska, Natalia Zeber-Lubecka, Ewa Grabowska, Bianka Swiderska,Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland. Polish Academy of Sciences, 02-106 Warsaw, Poland. University Hospital Basel and University of Basel, 4001 Basel, Switzerland. Centre of Postgraduate Medical Education, 01-8

Read publication here

30-spdthermo-orbitrap-exploris-480
A universal peptide matrix interactomics approach to disclose motif dependent protein binding2021Evelyn Ramberger, Lorena Suarez-Artiles, Daniel Perez-Hernandez, Mohamad Haji, Oliver Popp, Ulf Reimer, Achim Leutz, Gunnar Dittmar & Philipp MertinsMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany. Luxembourg Institute of Health, Luxembourg. JPT Peptide Technologies GmbH, Berlin, Germany. Humboldt University of Berlin, Berlin, Germany. University of Luxembourg

Read publication here

60-spdthermo-q-exactive-hf-x
Immunophenotyping assessment in a COVID-19 cohort (IMPACC): A prospective longitudinal study2021IMPACC Manuscript Writing TeamIMPACC

Read publication here

bruker-timstof-pro
AlphaPept, a modern and open framework for MS-based proteomics2021Maximilian T. Strauss, Isabell Bludau, Wen-Feng Zeng, Eugenia Voytik, Constantin Ammar, Julia Schessner, Rajesh Ilango, Michelle Gill, Florian Meier, Sander Willems & Matthias MannMax Planck Institute of Biochemistry, Martinsried, Germany. University of Copenhagen, Denmark. Nvidia Corporation, Santa Clara, CA, USA. OmicEra Diagnostics GmbH, Planegg, Germany. Jena University Hospital, Jena, Germany.

Read publication here

200-spdbruker-timstof-pro
A personalized mass spectrometry-based assay to monitor M-protein in multiple myeloma patients (EasyM)2021Mariya Liyasova, Zac McDonald, Paul Taylor, Kathleen Gorospe, Xin Xu, Chenyu Yao, Qixin Liu, Liqiang Yang, Eshetu G. Atenafu, Giovanni Piza, Bin Ma, Donna Reece, Suzanne TrudelRapid Novor, Canada. University of Waterloo, Canada. Princess Margaret Cancer Centre, Canada., ,

Read publication here

30-spd 60-spdthermo-orbitrap-fusion thermo-q-exactive
Exploitation of the Secretory Pathway by SARS-CoV-2 Envelope2021Guy J Pearson, Malgorzata Broncel, Ambrosius P Snijders & Jeremy G CarltonKing’s College London, UK. The Francis Crick Institute, UK.

Read publication here

30-spdthermo-orbitrap-fusion-lumos
Mass Spectrometry Provides a Highly Sensitive Noninvasive Means of Sequencing and Tracking M-Protein in the Blood of Multiple Myeloma Patients2021Zac McDonald, Paul Taylor, Mariya Liyasova, Qixin Liu & Bin MaRapid Novor, Canada

Read publication here

30-spdthermo-q-exactive
Rapid and Accurate Detection of Aminoglycoside-Modifying Enzymes and 16S rRNA Methyltransferases by Targeted Liquid Chromatography-Tandem Mass2021Dimard E. Foudrainehttps, Nikolaos Strepisa, Corné H. W. Klaassenhttps, Merel N. Raaphorsta, Annelies Verbona, Theo M. Luiderb, Wil H. F. Goessensa & Lennard J. M.Erasmus MC University Medical Center, Rotterdam, The Netherlands

Read publication here

100-spdthermo-q-exactive-hf
Synthetic Antigen Presenting cells reveal the diversity and functional specialisation of extracellular vesicles composing the fourth signal of T cell immunological synapses2021Pablo F. Céspedes, Ashwin Jainarayanan, Lola Fernández-Messina, Salvatore Valvo, David G. Saliba, Audun Kvalvaag, Elke Kurz, Huw Colin-York, Marco Fritzsche, Yanchun Peng, Tao Dong, Jesús A. Siller-Farfán, Omer Dushek, Michal Maj, Erdinc Sezgin, Ben PeacoThe University of Oxford, Oxford, UK. Universidad Autónoma de Madrid, Madrid, Spain. Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain. Karolinska Institutet, Stockholm, Sweden. MediCity, Nottingham, UK.

Read publication here

60-spdbruker-timstof-pro
A blood atlas of COVID-19 defines hallmarks of disease severity and specificity2021COvid-19 Multi-omics Blood ATlas (COMBAT) Consortium, Julian C Knight.University of Oxford

Read publication here

100-spdbruker-timstof-pro
An ultrasensitive method for analysis of viral spike N-glycoforms2021Sabyasachi Baboo, Jolene K Diedrich, Salvador Martínez-Bartolomé, Xiaoning Wang, Torben Schiffner, Bettina Groschel, William R Schief, James C Paulson & John R Yates IIIMassachusetts Institute of Technology and Harvard, Cambridge, MA, USA. The Scripps Research Institute, La Jolla, CA, USA.,

Read publication here

30-spd extended-methodbruker-timstof-pro
Proteomics of resistance to Notch1 inhibition in acute lymphoblastic leukemia reveals targetable kinase signatures2021Giulia Franciosa, Jos G. A. Smits, Sonia Minuzzo, Ana Martinez-Val, Stefano Indraccolo & Jesper V. OlsenUniversity of Padova, Padova, Italy. University of Copenhagen, Denmark.,

Read publication here

30-spd 60-spdthermo-orbitrap-exploris-480
Inhibition of eEF2K synergizes with glutaminase inhibitors or 4EBP1 depletion to suppress growth of triple-negative breast cancer cells2021YoungJun Ju, Yaacov Ben-David, Daniela Rotin & Eldad ZacksenhausUniversity Health Network, Toronto, Canada. Chinese Academic of Sciences, Guiyang, China. Guizhou Medical University, Guiyang, China. The Hospital for Sick Children, Toronto, Canada.

Read publication here

thermo-orbitrap-fusion-lumos
A fleet of Evosep One instruments supports a proteomics factory at Rapid Novor2021Evosep. Rapid NovorEvosep. Rapid Novor

Download application note

High Sensitivity Evotips2021EvosepEvosep

Download brochure

Unleashing the power of DIA combined with short gradients using Evosep One2021Florian Meier & Vadim DemchevFriedrich Shiller University, Jena, Germany. Francis Crick Institute, UK., ,

Watch webinar

100-spd 200-spd 60-spdbruker-timstof-pro
Unleashing the true power of DIA/SWATH data acquisition with short gradients – Rapid profiling of pre-clinical models and proteome dynamics2019Evosep

Download application note

Improve and enhance your proteome coverage with the Performance column2019Evosep,

Download application note

100-spd 60-spd
Evosep One: A Separation Tool Designed for Clinical Omics2019Evosep

Download brochure

Co-translational assembly and localized translation of nucleoporins in nuclear pore complex biogenesis2021Ophélie Lautier, Arianna Penzo, Jérôme Rouvière, Guillaume Chevreux, Louis Collet, Isabelle Loïodice, Angela Taddei, Frédéric Devaux, Martine A. Collart & Benoit PalancadeUniversité de Paris, Paris, France. Sorbonne Université, Paris, France. University of Geneva, Geneva, Switzerland.

Download publication

30-spd
Hemorrhage and saline resuscitation are associated with epigenetic and proteomic reprogramming in the rat lung2021Alexander Bonde, Trine G. Eskesen, Jacob Steinmetz, Erwin M. Schoof, Lene H.D. Blicher, Lars S. Rasmussen & Martin SillesenRigshospitalet, University of Copenhagen, Denmark. Technical University of Denmark, Lyngby, Denmark.

Download publication

30-spdthermo-orbitrap-fusion
Standardized workflow for precise mid- and high-throughput proteomics of blood biofluids2021Angela Mc Ardle, Aleksandra Binek, Annie Moradian, Blandine Chazarin Orgel, Alejandro Rivas, Kirstin E. Washington, Conor Phebus, Danica-Mae Manalo, James Go, Vidya Venkatraman, Casey Johnson, Qin Fu, Susan Cheng, Koen Raedschelders, Justyna-Fert Bober, SCedars-Sinai Medical Center, Los Angeles, CA, United States. University College Dublin, Dublin, Ireland.

Download publication

Watch webinar

Learn more

60-spdthermo-orbitrap-exploris-480
Malaria Parasite Schizont Egress Antigen-1 Plays an Essential Role in Nuclear Segregation during Schizogony2021Abigail J. Perrin, Claudine Bisson, Peter A. Faull, Matthew J. Renshaw, Rebecca A. Lees, Roland A. Fleck, Helen R. Saibil, Ambrosius P. Snijders, David A. Baker & Michael J. BlackmanThe Francis Crick Institute, London, UK. University of London, London, UK. King’s College London, London, UK. London School of Hygiene & Tropical Medicine, London, UK

Download publication

30-spdthermo-orbitrap-fusion-lumos
The COVIDome Explorer Researcher Portal2021Kelly D. Sullivan, Matthew D. Galbraith, Kohl T. Kinning, Kyle Bartsch, Nik Levinsky, Paula Araya, Keith P. Smith, Ross E. Granrath, Jessica R. Shaw, Ryan Baxter, Kimberly R. Jordan, Seth Russell, Monika Dzieciatkowska, Julie A. Reisz, Fabia Gamboni, FranUniversity of Colorado, CO, USA. University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Colorado School of Public Health, Aurora, CO, USA.

Download publication

30-spdbruker-timstof-pro
High sensitivity dia-PASEF proteomics with DIA-NN and FragPipe2021Vadim Demichev, Fengchao Yu, Guo Ci Teo, Lukasz Szyrwiel, George A. Rosenberger, Jens Decker, Stephanie Kaspar-Schoenefeld, Kathryn S. Lilley, Michael Mülleder, Alexey I. Nesvizhskii & Markus RalserThe Francis Crick Institute, London, UK. Charité – Universitätsmedizin Berlin, Germany. University of Cambridge, UK. University of Michigan, Ann Arbor, USA. Columbia University, New York, USA. Bruker Daltonics, Bremen, Germany, ,

Download publication or learn more on our website

100-spd 200-spd 60-spdbruker-timstof-pro
A robust mass spectrometer for precision medicine – the Orbitrap Exploris 240 mass spectrometer for large-scale plasma protein profiling2021Michelle L Dubuke, Sitara Chauhan, Sarah Trusiak & Emily I. ChenThermo Fisher Scientific, United States

Download application note

60-spdthermo-orbitrap-exploris-240
Integrative analysis of cell state changes in lung fibrosis with peripheral protein biomarkers2021Christoph H Mayr, Lukas M Simon, Gabriela Leuschner, Meshal Ansari, Janine Schniering, Philipp E Geyer, Ilias Angelidis, Maximilian Strunz, Pawandeep Singh, Nikolaus Kneidinger, Frank Reichenberger, Edith Silbernagel, Stephan Böhm, Heiko Adler, Michael LiHelmholtz Zentrum München, Munich, Germany. Ludwig‐Maximilians University (LMU) Munich, Munich, Germany. University Hospital Zurich, Zurich, Switzerland. Max Planck Institute of Biochemistry, Martinsried, Germany. Asklepios Fachkliniken Munich‐Gauting, Mu,

Download publication

100-spd 60-spdthermo-q-exactive-hf
Global proteomic analysis of extracellular matrix in mouse and human brain highlights relevance to cerebrovascular disease2021Alexandra Pokhilko, Gaia Brezzo, Lahiru Handunnetthi, Raphael Heilig, Rachel Lennon, Colin Smith, Stuart M Allan, Alessandra Granata, Sanjay Sinha, Tao Wang, Hugh S Markus, Alexandra Naba, Roman Fischer, Tom Van Agtmael, Karen Horsburgh & M. Zameel CaderUniversity of Oxford, UK. University of Edinburgh, UK. University of Glasgow. UK. University of Manchester, UK. Manchester Academic Health Science Centre, UK. Cambridge Biomedical Campus, Hills Road, UK. University of Illinois at Chicago, USA.

Download publication

60-spdbruker-timstof-pro
Evotips: Quick guide2022Evosep

Download guide

Rapid, robust and reproducible host-cell protein analysis with Evosep One2021Jiao Ma & Anders GiessingAstraZeneca, Novozymes, ,

Watch webinar

200-spd 60-spdbruker-timstof-pro thermo-orbitrap-fusion-lumos
Covid-19 research with Evosep One2021Angela McArdle & Mathias TrostCedars Sinai, Newcastle University

Watch webinar

60-spdthermo-orbitrap-exploris-480
A beginner’s guide to Evosep2021Nicolai Bache, Alexey Chernobrovkin & Raja NirojogiEvosep, Pelago Bioscience, University of Dundee

Watch webinar

60-spdthermo-orbitrap-exploris-480
Whisper is coming2021Evosep

Watch webinar

whisper-40spd
EVOSEP+2020Evosep

Watch webinar

extended-method
Powerful pairing of technologies and analytical approaches2019Thomas AngelGlaxoSmithKline

Watch webinar

Whisper™ step-by-step guide2021Evosep

Download guide

whisper-40spd
SPIN – Species by Proteome Investigation2021Patrick L. Rüther, Immanuel M. Husic, Pernille Bangsgaard, Kristian M. Gregersen, Pernille Pantmann, Milena Carvalho, RitaM. Godinho, Lukas Friedl, Joao Cascalheira, Marie Louise S. Jørkov, Michael Benedetti, Jonathan Haws, Nuno Bicho, Frido Welker, EnricUniversity of Copenhagen, Denmark. University of Algarve, Portugal. University of Louisville, USA. University of North Carolina, USA. University of West Bohemia, Czech Republic. University of New Mexico, Albuquerque, USA. Museum Nordsjælland, Denmark. Roy, ,

Download publication

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
High-resolution longitudinal serum proteome trajectories in COVID-19 reveal patients-specific seroconversion2021Philipp E. Geyer, Florian M. Arend, Sophia Doll, Marie-Luise Louiset, Sebastian Virreira Winter, Johannes B. Müller-Reif, Furkan M. Torun, Michael Weigand, Peter Eichhorn, Mathias Bruegel, Maximilian T. Strauss, Lesca M. Holdt, Matthias Mann & Daniel TeupOmicEra Diagnostics GmbH, Germany. University Hospital, LMU Munich, Germany. University of Copenhagen, Denmark.

Download publication

60-spdbruker-timstof-pro
The Host Interactome of Spike Expands the Tropism of SARS-CoV-22021Casimir Bamberger, Sandra Pankow, Salvador Martínez-Bartolomé, Jolene Diedrich, Robin Park & John Yates IIIDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA

Download publication

30-spdbruker-timstof-pro
Molecular origin of blood-based infrared fingerprints2021Liudmila Voronina, Cristina Leonardo, Johannes B. Mueller-Reif, Philipp E. Geyer, Marinus Huber, Michael Trubetskov, Kosmas V. Kepesidis, Jürgen Behr, Matthias Mann, Ferenc Krausz & Mihaela ŽigmanDepartment of Physics, Ludwig Maximilian University of Munich, Germany. Max Planck Institute of Quantum Optics, Garching, Germany. Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry,Germany. Novo Nordisk Foundation Cent

Download publication

thermo-q-exactive-hf-x
R1441G but not G201S Mutation Enhances LRRK2 Mediated Rab10 phosporylation in human Peripheral blood neutrophils2021Ying Fan, Raja S. Nirujogi, Alicia Garrido, Javier Ruiz Martínez, Alberto Bergareche-Yarza, Elisabet Mondragón Rezola, Ana Vinagre Aragón, Ioana Croitoru, Ana Gorostidi Pagola, Laura Paternain Markinez, Roy Alcalay, Richard A. Hickman, Jonas Duering, NeriUniversity of Dundee, UK. Hospital Clínic de Barcelona, Spain. Universitat de Barcelona, Spain. Biodonostia Health Research Institute, Spain. Columbia University Medical Center, New York, USA. The Michael J Fox Foundation for Parkinson's Research, New Yor

Download publication

60-spdthermo-q-exactive-hf-x
Spatial-proteomics reveal in-vivo phospho-signaling dynamics at subcellular resolution2021Ana Martinez-Val, Dorte B. Bekker-Jensen, Sophia Steigerwald, Adi Mehta, Trung Tran, Krzysztof Sikorski, Estefanía Torres-Vega, Ewa Kwasniewicz, Sólveig Hlín Brynjólfsdóttir, Lisa B. Frankel, Rasmus Kjøbsted, Nicolai Krogh, Alicia Lundby, Simon Bekker-JenUniversity of Copenhagen, Denmark. Oslo University Hospital, Norway.

Download publication or read more on our website

60-spdthermo-orbitrap-exploris-480
Basement membrane stiffness determines metastases formation2021Raphael Reuten, Sina Zendehroud, Monica Nicolau, Lutz Fleischhauer, Anu Laitala, Stefanie Kiderlen, Denise Nikodemus, Lena Wullkopf, Sebastian Rune Nielsen, Sarah McNeilly, Carina Prein, Maria Rafaeva, Erwin M. Schoof, Benjamin Furtwängler, Bo T. Porse, HUniversity of Copenhagen, Denmark. Freie Universität Berlin, Germany. Munich University of Applied Sciences, Germany. Center for Nanoscience-CeNS, Germany. University of Glasgow, UK. Technical University of Denmark, Denmark. KU Leuven, Belgium. Queen Mary

Download publication

30-spdthermo-orbitrap-exploris-480
Crystal structure of bacterial cytotoxic necrotizing factor CNFY reveals molecular building blocks for intoxication2021Paweena Chaoprasid, Peer Lukat, Sabrina Mühlen, Thomas Heidler, Emerich‐Mihai Gazdag, Shuangshuang Dong, Wenjie Bi, Christian Rüter, Marco Kirchenwitz, Anika Steffen, Lothar Jänsch, Theresia E B Stradal, Petra Dersch & Wulf BlankenfeldtUniversity of Münster, Germany. Helmholtz Centre for Infection Research, Germany. Deutsches Zentrum für Infektionsforschung, Germany. Technische Universität Braunschweig, Germany.

Download publication

bruker-timstof-pro
Interactions of Viral Proteins from Pathogenic and Low or Non-Pathogenic Orthohantaviruses with Human Type I Interferon Signaling2021Giulia Gallo, Grégory Caignard, Karine Badonnel, Guillaume Chevreux, Samuel Terrier, Agnieszka Szemiel, Gleyder Roman-Sosa, Florian Binder, Quan Gu, Ana Da Silva Filipe, Rainer G. Ulrich, Alain Kohl, Damien Vitour, Noël Tordo & Myriam ErmonvalInstitut Pasteur, France. Ecole Doctorale Complexité du Vivant, France. UMR 1161 Virologie, France. BREED, INRAE, Université Paris-Saclay, France. Université de Paris, France. MRC-University of Glasgow Centre for Virus Research, UK. Institute of Novel and

Download publication

30-spdthermo-orbitrap-fusion
Fluvastatin mitigates SARS-CoV-2 infection in human lung cells2020Francisco J. Zapatero-Belinchón, Rebecca Moeller, Lisa Lasswitz, Marco van Ham, Miriam Becker, Graham Brogden, Ebba Rosendal, Wenjie Bi, Belén Carriquí, Koushikul Islam, Annasara Lenman, Antonia P. Gunesch, Jared Kirui, Thomas Pietschmann, Anna K Överby,Medical School Hannover, Germany. Helmholtz Centre for Infection Research, Germany. University of Veterinary Medicine Hannover, Germany. Umeå University, Sweden. German Centre for Infection Research (DZIF), Germany.

Download publication

extended-methodbruker-timstof-pro
ABPP-HT – high-throughput activity-based profiling of deubiquitylating enzyme inhibitors in a cellular context2020Hannah Jones, Raphael Heilig, Roman Fischer, Benedikt M Kessler & Adan Pinto-FernandezUniversity of Oxford, United Kingdom.

Download publication

100-spdbruker-timstof-pro
Seroconversion stages COVID19 into distinct pathophysiological states2020Matthew D. Galbraith, Kohl T. Kinning, Kelly D. Sullivan, Ryan Baxter, Paula Araya, Kimberly R. Jordan, Seth Russell, Keith P. Smith, Ross E. Granrath, Jessica Shaw, Monika Dzieciatkowska, Tusharkanti Ghosh, Andrew A. Monte, Angelo D’Alessandro, Kirk C. HUniversity of Colorado, United States.

Download publication

30-spdbruker-timstof-pro
Deciphering the LRRK code: LRRK1 and LRRK2 phosphorylate distinct Rab proteins and are regulated by diverse mechanisms2020Asad U. Malik, Athanasios Karapetsas, Raja S. Nirujogi, Sebastian Mathea, Prosenjit Pal, Pawel Lis, Matthew Taylor, Elena Purlyte, Robert Gourlay, Mark Dorward, Simone Weidlich, Rachel Toth, Nicole K. Polinski, Stefan Knapp, Francesca Tonelli & Dario R AlUniversity of Dundee, United Kingdom. Johann Wolfgang Goethe University, Germany. Michael J Fox Foundation for Parkinson’s Research, United States.

Download publication

60-spdthermo-q-exactive-hf-x
Development of a multiplexed targeted mass spectrometry assay for LRRK2-phosphorylated Rabs and Ser910/Ser935 biomarker sites2020Raja S Nirujogi, Francesca Tonelli, Matthew Taylor, Pawel Lis, Alexander Zimprich, Esther Sammler & Dario R AlessiUniversity of Dundee, United States. Medical University of Vienna, Austria.,

Download publication

30-spd 60-spdthermo-orbitrap-exploris-480
diaPASEF: parallel accumulation–serial fragmentation combined with data-independent acquisition2020Florian Meier, Andreas-David Brunner, Max Frank, Annie Ha, Isabell Bludau, Eugenia Voytik, Stephanie Kaspar-Schoenefeld, Markus Lubeck, Oliver Raether, Nicolai Bache, Ruedi Aebersold, Ben C. Collins, Hannes L. Röst & Matthias MannMax Planck Institute of Biochemistry, Martinsried, Germany. Bruker Daltonik, Germany. ETH Zürich, Switzerland. University of Belfast, United Kingdom. University of Toronto, Canada., ,

Download publication or learn more on our website

 

100-spd 200-spd 60-spdbruker-timstof-pro
High throughput proteome and phosphorpoteome sample processing coupled to fast gradient DIA2020Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark, ,

Download publication

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Peptidomic analysis of urine from youths with early type 1 diabetes reveals novel bioactivity of uromodulin peptides in vitro2019SickKids Proteomics, Analytics, Robotics, and Chemical Biology Centre, Canada

Download publication

60-spdthermo-q-exactive-hf-x
Tech note: Evosep One: A gradient off-set focusing HPLC instrument for robust and high throughput proteomics2017

Download application note

Evosep One Field Test at the Max-Planck Institute of Biochemistry2017

Download application note

Gradient off-set focusing HPLC insturment for robust and high throughput clinical proteomics2017

Download application note

Sample loading protocol for Evotips2022

Download application note

Introducing the Evosep One – Instrument Overview2017

Watch

Optimizing data processing parameters for samples acquired on instruments using Advanced Peak Determination2018Thermo Fisher Scientific, United States

Download poster

100-spdthermo-q-exactive-hf-x
New Orbitrap Exploris 480 Mass Spectrometer Coupled with Evosep One2020Thermo Fisher Scientific, United States, ,

Download brochure

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Development of a robust and reprodusible method for detection of citrullination in complex samples2018University of Southern Denmark, Denmark

Download poster

60-spdthermo-orbitrap-fusion-lumos
A tale of two tails – efficient profiling of protein degraders by specific functional and target engagement readouts2020Pelago Biosciences, Sweden

Download publication

thermo-q-exactive-hf-x
How to get Speed and Depth in yout Host Cell Protein2018Bruker Daltonics, Germany

Watch

60-spdbruker-timstof-pro
A Novel LC System Embeds Analytes in Pre-formed Gradients for Rapid, Ultra-Robust Proteomics2018Max Planck Institute of Biochemistry, Martinsried Germany and Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

Download publication

60-spdthermo-q-exactive-hf-x
Online parallel accumulation – serial fragmentation (PASEF) with a novel trapped ion mobility mass spectrometer2018Max Planck Institute of Biochemistry, Martinsried and Bruker Daltonics, Germany

Download publication

200-spdbruker-timstof-pro
Robust and Reprodusible Protein Quantification in Plasma Using the Evosep One and the Agilent 6495 Triple Quadrupole LC/MS2020Agilent Technologies, United States

Download application note

60-spdagilent-6495-triple-quadrupole
High dynamic range proteome analysis with BoxCar DIA and super-resolution Orbitrap mass spectrometry2020Max Planck Institute of Biochemistry, Martinsried, Germany,

Download poster

100-spd 30-spdthermo-orbitrap-exploris-480
Clinical proteomics2018Max Planck Institute of Biochemistry, Martinsried, Germany

Download poster

thermo
Development of a Novel LC Concept for Clinical Proteomics2018Max Planck Institute of Biochemistry, Martinsried and Bruker Daltonics, Germany

Download poster

60-spdthermo
Increasing proteome coverage using cysteine-specific DIA Mass spectrometry – Cys-DIA2020University of Southern Denmark

Download publication

60-spdthermo-q-exactive-hf-x
A network of RNA-binding proteins controls translation efficiency to activate anaerobic metabolism2020SickKids Proteomics, Analytics, Robotics, and Chemical Biology Centre, Canada

Download publication

60-spdthermo-orbitrap-fusion-lumos
Improving proteome coverage and peptide identification rates in short LC gradients2020Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark, ,

Watch

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
High-throughput proteomics with Evosep One2020Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark, ,

Watch

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Rapid proteome analyses using the Evosep One2018Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

Watch

60-spdthermo-q-exactive-hf
Targeted assay development for quantifying protein half-life over a range of mouse tissues2019Glaxo Smith Kline, Unites States

Watch

300-spd
Sensitive, Rapid, Robust and Reproducible Workflow for Host Cell Protein Profiling in Biopharmaceutical Process Development2020Glaxo Smith Kline, Unites States,

Download publication

30-spd 60-spdthermo-orbitrap-fusion-lumos
Using Artificial Intelligence on Ultrafast LC-MSMS-DIA runs for Bacterial Identification in Urine2019CHU Québec Université Laval Research Center, Canada, ,

Watch

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Characterization of glutathione proteome in CHO cells and its relationship with productivity and cholesterol synthesis2020Technical University of Denmark

Download publication

30-spdthermo-q-exactive-hf-x
High-throughput 4D-Proteomics – Application of dia-PASEF® and the Evosep One for short gradients2020Bruker Daltonics, Germany, , ,

Download application note

100-spd 200-spd 300-spd 60-spdbruker-timstof-pro
MaxQuant software for ion moiblity enhanced shotgun proteomics2020Bruker Daltonics, Germany

Download publication

100-spdbruker-timstof-pro
Plasma proteomics goes high-throughput – timsTOF Pro with PASEF and 4D feature alignment to quantify 500 plasma proteins in 11.5 min2019Bruker Daltonics, Germany

Download publication

100-spdbruker-timstof-pro
Fast and reproducible phosphoproteomics using MagReSyn® Amine and Tim-IMAC HP magnetic beads and the Evosep One2020Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

Download application note

60-spdthermo-orbitrap-exploris-480
Consistency, consistency – Automated Sample Prep for Translational Proteomics2020Thermo Fisher Scientific, United States

Watch webinar

60-spdthermo
An Ultra High-Throughput Plasma Protein Profiling (uHTPPP) Workflow Using a Modified Quadrupole-Orbitrap Mass Spectrometer2020Thermo Fisher Scientific, United States,

Download poster or booklet

30-spd 60-spdthermo-orbitrap-exploris-240
Scalable and Automated Plasma Workflow Based on the Thermo Scientific Q Exactive HF-X MS Platform2019Thermo Fisher Scientific, United States, ,

Learn more or download application note

100-spd 30-spd 60-spdthermo-q-exactive-hf-x
Advancing Interactomics Workflows with 4D-Proteomics on the timsTOF Pro2020Max Planck Institute of Biochemistry, Martinsried, Germany

Watch webinar

60-spdbruker-timstof-pro
Oncogenic Mutations Rewire Signaling Pathways by Switching Protein Recruitment to Phosphotyrosine Sites2019Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

Learn more or download publication

60-spdthermo-q-exactive-hf-x
timsTOF Pro with PASEF and Evosep One: Maximizing throughput, robustness and analytical depth for shotgun proteomics2018Bruker Daltonics, Germany, ,

Download publication or download poster

100-spd 200-spd 60-spdbruker-timstof-pro
Evidence of Structural Protein Damage and Membrane Lipid Remodeling in Red Blood Cells from COVID-19 Patients2020University of Colorado, United States

Download publication

bruker-timstof-pro
Development of mass spectrometry-based targeted assay for direct detection of novel SARS-CoV-2 coronavirus from clinical specimens2020Mayo Clinic Rochester, United States,

Download publication

100-spd 200-spdthermo-orbitrap-exploris-480
Multi-level proteomics reveals host-perturbation strategies of SARS-CoV-2 and SARS-CoV2020Max Planck Institute of Biochemistry, Martinsried, Germany,

Download publication

30-spd 60-spdthermo-q-exactive-hf-x
Serum Proteomics in COVID-19 Patients: Altered Coagulation and Complement Status as a Function of IL-6 Level2020University of Colorado, US

Download publication

bruker-timstof-pro
A paired liver biopsy and plasma proteomics study reveals circulating biomarkers for alcohol-related liver disease2020Max Planck Institute of Biochemistry, Martinsried, Germany and Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark

Download or read blog post

30-spdthermo-q-exactive-hf-x
Evosep One Enables Robust Deep Proteome Coverage Using Tandem Mass Tags While Significantly Reducing Instrument Time2019SickKids Proteomics, Analytics, Robotics, and Chemical Biology Centre, Canada,

Watch

 

30-spd 60-spdthermo-orbitrap-fusion-lumos
Increasing Throughput: From Pre-Clinical Models To Protein Complexes2019ETH Zürich, Switzerland

Watch

60-spdsciex
In-Depth Characterization of Staurosporine Induced Proteome Thermal Stability Changes2020Pelago Biosciences, Sweden

Download publication

thermo-q-exactive-hf
Fast and Robust Proteome Screening Platform Identifies Neutrophil Extracellular Trap Formation in the Lung in Response to Cobalt Ferrite Nanoparticles2020University of Southern Denmark

Download

60-spdthermo-orbitrap-fusion-lumos
A Compact Quadrupole-Orbitrap Mass Spectrometer With Faims Interface Improves Proteome Coverage In Short Lc Gradients2020Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark, ,

Download

100-spd 200-spd 60-spdthermo-orbitrap-exploris-480
Covalent Protein Painting Reveals Structural Changes In The Proteome In Alzheimer Disease2020Scripps Research Institute, United States

Download

30-spdthermo-orbitrap-fusion-lumos
Advanced Host Cell Protein (Hcp) Analysis With Tims Qtof Ms Powers Biopharmaceutical Development 2019Bruker Daltonics, Germany

Download

60-spdbruker-timstof-pro
Accurate Detection Of The Four Most Prevalent Carbapenemases In E. Coli And K. Pneumoniae By High-Resolution Mass Spectrometry2019Erasmus MC, The Netherlands

Download

100-spdthermo-q-exactive-hf
Study: Increased De Novo Protein Sequencing Coverage With Optimal Protease Cocktail2019Rapid Novor, Canada

Download

thermo-orbitrap-fusion
High-Throughput Proteomics Quantification Enabled by Fast LC Separation and Advanced PRM Acquisition2018Thermo Fisher Scientific, United States, ,

Download

100-spd 200-spd 60-spdthermo-q-exactive-hf-x
Fast Confirmatory Analysis of Rhuepos in Plasma for Horseracing Doping Control2019Le Laboratoire des Courses Hippiques (LCH), France

Download

100-spdthermo-q-exactive-hf

Want to know more?

Our team is ready to help you find the method fitting your research need. Fill out our contact form and we will get back to you as soon as possible